PlantSME Plant secondary metabolism enzyme database

Nicotiana tabacum (nicotiana_tabacum)

Imported from atlas release summary for Nicotiana tabacum.

3857
Candidate Protein Records
3200
Pathway-Level Records
8259
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 997 19 UGT (317) View species results
Phenylpropanoid pathway 678 12 POD (311) View species results
Alkaloid pathway 657 27 7DLGT (125) View species results
Flavonoid pathway 418 14 UFGT (263) View species results
Rosmarinic acid pathway 288 7 C4H (117) View species results
Steroid pathway 162 14 CAS (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3378 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 524 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
nicotiana_tabacum_Nitab4.5_0011903g0020.1 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
nicotiana_tabacum_Nitab4.5_0012375g0020.1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
nicotiana_tabacum_Nitab4.5_0012401g0010.1 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
nicotiana_tabacum_Nitab4.5_0012493g0010.1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
nicotiana_tabacum_Nitab4.5_0012619g0010.1 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
nicotiana_tabacum_Nitab4.5_0012702g0010.1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
nicotiana_tabacum_Nitab4.5_0012764g0010.1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
nicotiana_tabacum_Nitab4.5_0013262g0010.1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
nicotiana_tabacum_Nitab4.5_0013812g0010.1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
nicotiana_tabacum_Nitab4.5_0014166g0010.1 Terpenoid BAHD medium pass BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
nicotiana_tabacum_Nitab4.5_0016273g0010.1 Terpenoid BAHD low borderline BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
nicotiana_tabacum_Nitab4.5_0016301g0010.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
nicotiana_tabacum_Nitab4.5_0016524g0010.1 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
nicotiana_tabacum_Nitab4.5_0017074g0010.1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
nicotiana_tabacum_Nitab4.5_0018022g0010.1 Terpenoid BAHD medium pass BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
nicotiana_tabacum_Nitab4.5_0018927g0010.1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
nicotiana_tabacum_Nitab4.5_0020250g0020.1 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
nicotiana_tabacum_Nitab4.5_0020410g0010.1 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
nicotiana_tabacum_Nitab4.5_0026365g0010.1 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH