PlantSME Plant secondary metabolism enzyme database

Nicotiana tabacum (nicotiana_tabacum)

Imported from atlas release summary for Nicotiana tabacum.

3857
Candidate Protein Records
3200
Pathway-Level Records
8259
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 997 19 UGT (317) View species results
Phenylpropanoid pathway 678 12 POD (311) View species results
Alkaloid pathway 657 27 7DLGT (125) View species results
Flavonoid pathway 418 14 UFGT (263) View species results
Rosmarinic acid pathway 288 7 C4H (117) View species results
Steroid pathway 162 14 CAS (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3378 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 524 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Protein/Isoform Record Pathway Family Confidence Status Best Target
nicotiana_tabacum_Nitab4.5_0013007g0030.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
nicotiana_tabacum_Nitab4.5_0013327g0010.1 Terpenoid TPS medium pass TPS__00119__sp_G8H5N3_TPS16_SOLLC
nicotiana_tabacum_Nitab4.5_0013713g0010.1 Terpenoid TPS medium pass TPS__00116__sp_G5CV54_TPS14_SOLLC
nicotiana_tabacum_Nitab4.5_0013755g0010.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
nicotiana_tabacum_Nitab4.5_0015221g0010.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
nicotiana_tabacum_Nitab4.5_0015221g0020.1 Terpenoid TPS low borderline TPS__00064__sp_C0KWV4_GRNLG_PERFH
nicotiana_tabacum_Nitab4.5_0015240g0010.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
nicotiana_tabacum_Nitab4.5_0015320g0010.1 Terpenoid TPS medium pass TPS__00117__sp_G8H5M7_TPS9_SOLHA
nicotiana_tabacum_Nitab4.5_0015482g0010.1 Terpenoid TPS medium pass TPS__00119__sp_G8H5N3_TPS16_SOLLC
nicotiana_tabacum_Nitab4.5_0016435g0010.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
nicotiana_tabacum_Nitab4.5_0018766g0010.1 Terpenoid TPS medium pass TPS__00118__sp_G8H5N0_TPS17_SOLHA
nicotiana_tabacum_Nitab4.5_0019354g0010.1 Terpenoid TPS medium pass TPS__00117__sp_G8H5M7_TPS9_SOLHA
nicotiana_tabacum_Nitab4.5_0021312g0010.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
nicotiana_tabacum_Nitab4.5_0021405g0010.1 Terpenoid TPS medium pass TPS__00031__sp_A0A1X9ISH5_KSL3_ISORU
nicotiana_tabacum_Nitab4.5_0021810g0010.1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
nicotiana_tabacum_Nitab4.5_0024613g0010.1 Terpenoid TPS medium pass TPS__00004__sp_A0A0M5L832_TPS14_TRIWF
nicotiana_tabacum_Nitab4.5_0024613g0020.1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
nicotiana_tabacum_Nitab4.5_0025361g0010.1 Terpenoid TPS medium pass TPS__00021__sp_A0A1V0QSF8_TS3FN_CANSA
nicotiana_tabacum_Nitab4.5_0027931g0010.1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
nicotiana_tabacum_Nitab4.5_0028193g0010.1 Terpenoid TPS medium pass TPS__00078__sp_D5KXD2_TPS12_SOLLC