Nicotiana tomentosiformis (nicotiana_tomentosiformis)
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Imported from atlas release summary for Nicotiana tomentosiformis.
1937
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1937
Candidate Genes
BAHD
6.07%
C4H
5.94%
C3'H/CYP98A
5.29%
POD
4.48%
NMT
4.46%
4CL
3.99%
UFGT
3.75%
UGT
3.62%
Other Families
62.41%
More Families (97)
T3O
165
3.54%
7DLGT
160
3.43%
IFS
154
3.3%
CYP76
148
3.17%
F3H
126
2.7%
F3'H/CYP75B
100
2.14%
DWF4/CYP90B1
97
2.08%
STR
90
1.93%
BR6OX2/CYP85A2
84
1.8%
CYP71
80
1.71%
CAS
77
1.65%
TPS
75
1.61%
IFR
68
1.46%
CAD
68
1.46%
TRI/TRII
67
1.44%
GES
67
1.44%
SMT1/SMT2/SMT3
65
1.39%
CODM/T6ODM
60
1.29%
H6H
55
1.18%
CSE
51
1.09%
LAC
48
1.03%
TAT
48
1.03%
SGD
45
0.96%
RAS
37
0.79%
7DLH
36
0.77%
GS
35
0.75%
CCR
31
0.66%
HCT
31
0.66%
CYP90D1
30
0.64%
PYKS
29
0.62%
F5H/CYP84A
29
0.62%
BBE
27
0.58%
T16H
26
0.56%
CPD/CYP90A1
26
0.56%
NCS
25
0.54%
COMT
25
0.54%
ANR
24
0.51%
PMT
22
0.47%
F3'5'H/CYP75A
22
0.47%
IO
21
0.45%
SLS
20
0.43%
FPPS
19
0.41%
BR6OX1/CYP85A1
18
0.39%
ROT3/CYP90C1
17
0.36%
G8O/G8H
16
0.34%
16OMT
16
0.34%
FNS
16
0.34%
SQS/FDFT1
16
0.34%
CYP51G1
16
0.34%
LAMT
15
0.32%
DFR
15
0.32%
COR
13
0.28%
CNMT
12
0.26%
PAL
12
0.26%
CCoAOMT
12
0.26%
CPR
11
0.24%
8HGO
10
0.21%
DET2
10
0.21%
GGPPS
10
0.21%
MPO
9
0.19%
TDC
9
0.19%
TYDC_DDC
9
0.19%
ANS/LDOX
9
0.19%
CYP719
8
0.17%
CHS
8
0.17%
CYP80B1
7
0.15%
ISY
7
0.15%
HPPR
7
0.15%
SQE
7
0.15%
SMO1/SMO2
6
0.13%
AACT
6
0.13%
MVK
6
0.13%
MVD
5
0.11%
PMK
5
0.11%
CHI
4
0.09%
CPI1
4
0.09%
DWF1
4
0.09%
DXS
4
0.09%
6OMT_4OMT_SOMT
3
0.06%
HYD1
3
0.06%
DWF7
3
0.06%
HMGR
3
0.06%
HDR/IspH
3
0.06%
HMGS
3
0.06%
HDS/IspG
3
0.06%
ADC
2
0.04%
XMT_MXMT_DXMT
2
0.04%
CYP80F1
2
0.04%
ODC
2
0.04%
MCT/IspD
2
0.04%
IDI
2
0.04%
CMK/IspE
2
0.04%
FLS
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 562 | 19 | BAHD (220) | View species results |
| Alkaloid pathway | 423 | 19 | NMT (90) | View species results |
| Phenylpropanoid pathway | 404 | 11 | POD (200) | View species results |
| Flavonoid pathway | 224 | 12 | UFGT (148) | View species results |
| Rosmarinic acid pathway | 180 | 7 | C4H (76) | View species results |
| Steroid pathway | 144 | 11 | CAS (63) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1646 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 351 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| nicotiana_tomentosiformis_XP_009600395.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| nicotiana_tomentosiformis_XP_009600771.1 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| nicotiana_tomentosiformis_XP_009600999.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| nicotiana_tomentosiformis_XP_009601001.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| nicotiana_tomentosiformis_XP_009601275.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| nicotiana_tomentosiformis_XP_009601356.1 | Terpenoid | BAHD | medium | pass | BAHD__00076__sp_Q9FLM3_ZDH23_ARATH |
| nicotiana_tomentosiformis_XP_009601405.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| nicotiana_tomentosiformis_XP_009601485.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| nicotiana_tomentosiformis_XP_009602034.1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| nicotiana_tomentosiformis_XP_009602090.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| nicotiana_tomentosiformis_XP_009602178.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| nicotiana_tomentosiformis_XP_009602179.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| nicotiana_tomentosiformis_XP_009602397.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| nicotiana_tomentosiformis_XP_009602470.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009602648.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| nicotiana_tomentosiformis_XP_009602649.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| nicotiana_tomentosiformis_XP_009602833.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009602892.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| nicotiana_tomentosiformis_XP_009603038.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| nicotiana_tomentosiformis_XP_009603396.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009603408.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| nicotiana_tomentosiformis_XP_009603648.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| nicotiana_tomentosiformis_XP_009603729.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| nicotiana_tomentosiformis_XP_009604081.1 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009604415.1 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| nicotiana_tomentosiformis_XP_009604796.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009604797.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009605019.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| nicotiana_tomentosiformis_XP_009606073.1 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| nicotiana_tomentosiformis_XP_009606074.1 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| nicotiana_tomentosiformis_XP_009606246.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009606357.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| nicotiana_tomentosiformis_XP_009606423.1 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| nicotiana_tomentosiformis_XP_009606783.2 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| nicotiana_tomentosiformis_XP_009606831.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| nicotiana_tomentosiformis_XP_009607076.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009607096.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| nicotiana_tomentosiformis_XP_009607411.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| nicotiana_tomentosiformis_XP_009607740.2 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| nicotiana_tomentosiformis_XP_009607746.1 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| nicotiana_tomentosiformis_XP_009608177.1 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| nicotiana_tomentosiformis_XP_009608180.1 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| nicotiana_tomentosiformis_XP_009608187.1 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| nicotiana_tomentosiformis_XP_009608194.1 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| nicotiana_tomentosiformis_XP_009608981.1 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| nicotiana_tomentosiformis_XP_009609255.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| nicotiana_tomentosiformis_XP_009609494.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| nicotiana_tomentosiformis_XP_009609583.1 | Terpenoid | BAHD | medium | pass | BAHD__00061__sp_Q8VYS8_ZDH24_ARATH |
| nicotiana_tomentosiformis_XP_009609711.1 | Terpenoid | BAHD | medium | pass | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| nicotiana_tomentosiformis_XP_009609761.1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |