PlantSME Plant secondary metabolism enzyme database

Nissolia schottii (nissolia_schottii)

Imported from atlas release summary for Nissolia schottii.

1409
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.03% Alkaloid pathway 22.64% Phenylpropanoid pathway 21.08% Flavonoid pathway 14.55% Rosmarinic acid pathway 7.24% Steroid pathway 5.46%
Family Distribution
C4H 6.32% C3'H/CYP98A 5.6% BAHD 5.38% UGT 4.09% CYP76 4.06% POD 3.82% 7DLGT 3.77% UFGT 3.69%
Other Families 63.28%
More Families (96)
4CL 132 3.55% IFS 129 3.47% F3H 112 3.01% T3O 110 2.96% NMT 100 2.69% DWF4/CYP90B1 90 2.42% F3'H/CYP75B 84 2.26% CODM/T6ODM 70 1.88% H6H 68 1.83% BR6OX2/CYP85A2 66 1.78% STR 60 1.61% CAD 53 1.43% CYP71 50 1.35% G8O/G8H 45 1.21% COMT 45 1.21% CAS 41 1.1% SMT1/SMT2/SMT3 41 1.1% SGD 38 1.02% CSE 38 1.02% TPS 37 1.0% TRI/TRII 36 0.97% IFR 36 0.97% LAC 35 0.94% GES 34 0.91% CYP90D1 34 0.91% PYKS 33 0.89% GS 32 0.86% 16OMT 30 0.81% T16H 30 0.81% F5H/CYP84A 30 0.81% HCT 30 0.81% IO 29 0.78% BBE 26 0.7% ANR 25 0.67% FNS 25 0.67% RAS 25 0.67% CCR 24 0.65% SLS 23 0.62% ROT3/CYP90C1 22 0.59% PMT 21 0.56% ANS/LDOX 20 0.54% 7DLH 19 0.51% TAT 18 0.48% F3'5'H/CYP75A 17 0.46% CYP51G1 16 0.43% CNMT 15 0.4% 8HGO 13 0.35% COR 13 0.35% BR6OX1/CYP85A1 13 0.35% PAL 12 0.32% CHS 11 0.3% MPO 9 0.24% NCS 9 0.24% DFR 9 0.24% LAMT 8 0.22% CCoAOMT 8 0.22% SQS/FDFT1 8 0.22% CPD/CYP90A1 8 0.22% FPPS 8 0.22% DXS 8 0.22% FLS 7 0.19% TDC 6 0.16% CPR 6 0.16% GGPPS 6 0.16% AACT 6 0.16% HMGR 6 0.16% CYP80B1 5 0.13% CYP719 5 0.13% CHI 5 0.13% DET2 5 0.13% SQE 5 0.13% SMO1/SMO2 5 0.13% HMGS 5 0.13% MVK 5 0.13% ISY 4 0.11% HPPR 4 0.11% MVD 4 0.11% TYDC_DDC 3 0.08% 6OMT_4OMT_SOMT 3 0.08% DXR 3 0.08% MCT/IspD 3 0.08% ADC 2 0.05% XMT_MXMT_DXMT 2 0.05% ODC 2 0.05% DWF5 2 0.05% CPI1 2 0.05% DWF1 1 0.03% HYD1 1 0.03% FK 1 0.03% DWF7 1 0.03% IDI 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03% HDR/IspH 1 0.03% HDS/IspG 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 409 19 BAHD (157) View species results
Alkaloid pathway 319 24 7DLGT (59) View species results
Phenylpropanoid pathway 297 11 POD (123) View species results
Flavonoid pathway 205 11 UFGT (129) View species results
Rosmarinic acid pathway 102 7 C4H (42) View species results
Steroid pathway 77 11 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1419 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 255 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status Best Target
Nschscaffold1633_cov1180067340 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Nschscaffold17261_cov1150076260 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold187479_cov1160086200 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Nschscaffold3599_cov760180580 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold4064_cov1110193640 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold524618_cov1120268300 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold525437_cov1140280350 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold587_cov1090298660 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Nschscaffold587_cov1090298670 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA