Noteroclada confluens (noteroclada_confluens)
Imported from atlas release summary for Noteroclada confluens.
1374
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1374
Candidate Genes
C4H
9.17%
C3'H/CYP98A
6.57%
CYP76
5.9%
BAHD
5.11%
POD
4.19%
4CL
3.93%
IFS
3.42%
STR
2.94%
Other Families
58.76%
More Families (96)
BR6OX2/CYP85A2
110
2.81%
DWF4/CYP90B1
104
2.66%
T3O
102
2.61%
NMT
93
2.38%
F3'H/CYP75B
89
2.27%
F3H
84
2.15%
G8O/G8H
73
1.87%
CSE
73
1.87%
UGT
72
1.84%
H6H
64
1.64%
F3'5'H/CYP75A
64
1.64%
7DLGT
61
1.56%
IO
58
1.48%
RAS
58
1.48%
UFGT
57
1.46%
HCT
54
1.38%
IFR
53
1.35%
SMT1/SMT2/SMT3
52
1.33%
GS
50
1.28%
T16H
45
1.15%
CODM/T6ODM
40
1.02%
TRI/TRII
36
0.92%
PAL
33
0.84%
CAD
32
0.82%
CAS
30
0.77%
PYKS
29
0.74%
LAMT
28
0.72%
LAC
28
0.72%
COMT
23
0.59%
CYP80B1
21
0.54%
FNS
21
0.54%
CPD/CYP90A1
21
0.54%
7DLH
20
0.51%
NCS
20
0.51%
ANS/LDOX
20
0.51%
CHS
20
0.51%
SLS
19
0.49%
8HGO
17
0.43%
CYP90D1
17
0.43%
BR6OX1/CYP85A1
17
0.43%
CYP719
16
0.41%
F5H/CYP84A
16
0.41%
TPS
16
0.41%
PMT
15
0.38%
SGD
15
0.38%
CCR
15
0.38%
CNMT
14
0.36%
COR
13
0.33%
ANR
12
0.31%
DFR
12
0.31%
CYP71
12
0.31%
SQS/FDFT1
11
0.28%
FPPS
11
0.28%
CPR
10
0.26%
TAT
10
0.26%
ROT3/CYP90C1
10
0.26%
CYP51G1
10
0.26%
AACT
10
0.26%
GES
9
0.23%
DET2
9
0.23%
BBE
7
0.18%
ISY
7
0.18%
GGPPS
7
0.18%
ADC
6
0.15%
XMT_MXMT_DXMT
6
0.15%
DWF1
6
0.15%
SMO1/SMO2
6
0.15%
HMGR
6
0.15%
TDC
5
0.13%
16OMT
5
0.13%
MPO
5
0.13%
DWF5
5
0.13%
MDS/IspF
5
0.13%
DXR
5
0.13%
MCT/IspD
5
0.13%
DXS
5
0.13%
CYP80F1
4
0.1%
CHI
4
0.1%
CCoAOMT
4
0.1%
MVK
4
0.1%
TYDC_DDC
3
0.08%
6OMT_4OMT_SOMT
3
0.08%
FLS
3
0.08%
HYD1
3
0.08%
CMK/IspE
3
0.08%
MVD
3
0.08%
HMGS
3
0.08%
PMK
3
0.08%
ODC
2
0.05%
HPPR
2
0.05%
SQE
2
0.05%
DWF7
2
0.05%
HDS/IspG
2
0.05%
IDI
2
0.05%
HDR/IspH
2
0.05%
CPI1
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 384 | 13 | POD (152) | View species results |
| Terpenoid pathway | 337 | 20 | BAHD (116) | View species results |
| Alkaloid pathway | 242 | 20 | NMT (36) | View species results |
| Rosmarinic acid pathway | 159 | 7 | C4H (86) | View species results |
| Flavonoid pathway | 157 | 13 | UFGT (56) | View species results |
| Steroid pathway | 95 | 15 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1809 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 312 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ncon10556840023630 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon12010120049660 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon12121370057430 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon12166150061700 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon12282270065770 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon13380710100060 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon13446680107240 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon13980860145210 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Ncon14785960160090 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon14955610166960 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15043930174230 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15463310205770 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15472340206480 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15773720225840 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15942850256270 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon15958600257400 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon16010710261850 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon16446780305480 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon16916880414800 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Ncon9824400521450 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |