Ochroma pyramidale (ochroma_pyramidale)
/
Imported from atlas release summary for Ochroma pyramidale.
2074
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2074
Candidate Genes
C4H
5.89%
BAHD
5.72%
C3'H/CYP98A
5.7%
POD
4.03%
4CL
3.86%
CYP76
3.8%
F3H
3.61%
T3O
3.45%
Other Families
63.95%
More Families (97)
IFS
177
3.4%
UGT
160
3.07%
7DLGT
127
2.44%
UFGT
125
2.4%
NMT
121
2.32%
STR
112
2.15%
CAD
112
2.15%
F3'H/CYP75B
107
2.05%
DWF4/CYP90B1
104
2.0%
CODM/T6ODM
101
1.94%
BR6OX2/CYP85A2
94
1.8%
H6H
87
1.67%
LAC
83
1.59%
CYP71
79
1.52%
GS
73
1.4%
CAS
65
1.25%
SMT1/SMT2/SMT3
63
1.21%
IFR
57
1.09%
TPS
55
1.06%
CYP90D1
53
1.02%
PYKS
51
0.98%
GES
49
0.94%
TRI/TRII
48
0.92%
CSE
47
0.9%
HCT
47
0.9%
RAS
44
0.84%
T16H
43
0.83%
G8O/G8H
42
0.81%
BBE
41
0.79%
F5H/CYP84A
40
0.77%
PAL
39
0.75%
COMT
38
0.73%
PMT
37
0.71%
F3'5'H/CYP75A
37
0.71%
FNS
35
0.67%
IO
34
0.65%
NCS
34
0.65%
SGD
31
0.59%
BR6OX1/CYP85A1
31
0.59%
7DLH
30
0.58%
COR
27
0.52%
CCR
27
0.52%
CPD/CYP90A1
27
0.52%
ANR
26
0.5%
16OMT
22
0.42%
TAT
22
0.42%
8HGO
21
0.4%
DFR
21
0.4%
CHS
21
0.4%
SLS
20
0.38%
ROT3/CYP90C1
19
0.36%
LAMT
18
0.35%
ANS/LDOX
18
0.35%
CYP51G1
18
0.35%
CYP719
17
0.33%
MPO
17
0.33%
CNMT
15
0.29%
CPR
15
0.29%
CCoAOMT
14
0.27%
FPPS
13
0.25%
HMGR
11
0.21%
AACT
10
0.19%
DXS
10
0.19%
GGPPS
10
0.19%
SQS/FDFT1
9
0.17%
SMO1/SMO2
9
0.17%
MVD
9
0.17%
SQE
8
0.15%
CHI
7
0.13%
HPPR
7
0.13%
MVK
7
0.13%
CYP80B1
6
0.12%
ISY
6
0.12%
ODC
5
0.1%
ADC
5
0.1%
TDC
5
0.1%
FK
5
0.1%
DET2
5
0.1%
6OMT_4OMT_SOMT
4
0.08%
MDS/IspF
4
0.08%
HMGS
4
0.08%
XMT_MXMT_DXMT
3
0.06%
DWF1
3
0.06%
MCT/IspD
3
0.06%
PMK
3
0.06%
GPPS
3
0.06%
HDR/IspH
3
0.06%
DXR
3
0.06%
TYDC_DDC
2
0.04%
CPI1
2
0.04%
DWF7
2
0.04%
IDI
2
0.04%
HDS/IspG
2
0.04%
CMK/IspE
2
0.04%
FLS
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 574 | 21 | BAHD (232) | View species results |
| Phenylpropanoid pathway | 507 | 13 | POD (184) | View species results |
| Alkaloid pathway | 493 | 22 | NMT (64) | View species results |
| Flavonoid pathway | 225 | 10 | UFGT (110) | View species results |
| Rosmarinic acid pathway | 155 | 7 | C4H (53) | View species results |
| Steroid pathway | 120 | 11 | CAS (54) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1960 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 389 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| ochroma_pyramidale_OCHPYR17966_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| ochroma_pyramidale_OCHPYR18048_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| ochroma_pyramidale_OCHPYR18450_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| ochroma_pyramidale_OCHPYR19068_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| ochroma_pyramidale_OCHPYR19159_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| ochroma_pyramidale_OCHPYR19547_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| ochroma_pyramidale_OCHPYR19938_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| ochroma_pyramidale_OCHPYR19992_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| ochroma_pyramidale_OCHPYR21015_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| ochroma_pyramidale_OCHPYR21194_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| ochroma_pyramidale_OCHPYR21345_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| ochroma_pyramidale_OCHPYR21769_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| ochroma_pyramidale_OCHPYR22020_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| ochroma_pyramidale_OCHPYR22878_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| ochroma_pyramidale_OCHPYR23680_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| ochroma_pyramidale_OCHPYR24198_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| ochroma_pyramidale_OCHPYR24778_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| ochroma_pyramidale_OCHPYR24928_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| ochroma_pyramidale_OCHPYR25471_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| ochroma_pyramidale_OCHPYR25754_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| ochroma_pyramidale_OCHPYR25951_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| ochroma_pyramidale_OCHPYR26071_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| ochroma_pyramidale_OCHPYR26072_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| ochroma_pyramidale_OCHPYR26863_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| ochroma_pyramidale_OCHPYR27656_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00034__sp_Q5VN06_CLF_ORYSJ |
| ochroma_pyramidale_OCHPYR27842_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| ochroma_pyramidale_OCHPYR28177_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| ochroma_pyramidale_OCHPYR28764_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| ochroma_pyramidale_OCHPYR28878_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| ochroma_pyramidale_OCHPYR29444_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| ochroma_pyramidale_OCHPYR29936_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| ochroma_pyramidale_OCHPYR30046_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| ochroma_pyramidale_OCHPYR30614_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| ochroma_pyramidale_OCHPYR30648_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| ochroma_pyramidale_OCHPYR32410_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| ochroma_pyramidale_OCHPYR32421_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| ochroma_pyramidale_OCHPYR33019_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| ochroma_pyramidale_OCHPYR33639_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| ochroma_pyramidale_OCHPYR33708_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| ochroma_pyramidale_OCHPYR33713_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| ochroma_pyramidale_OCHPYR34251_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| ochroma_pyramidale_OCHPYR34333_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| ochroma_pyramidale_OCHPYR34750_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| ochroma_pyramidale_OCHPYR34800_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| ochroma_pyramidale_OCHPYR35237_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| ochroma_pyramidale_OCHPYR36413_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| ochroma_pyramidale_OCHPYR36869_OCHPYR | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| ochroma_pyramidale_OCHPYR37438_OCHPYR | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| ochroma_pyramidale_OCHPYR37530_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB |
| ochroma_pyramidale_OCHPYR37847_OCHPYR | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |