Ochroma pyramidale (ochroma_pyramidale)
/
Imported from atlas release summary for Ochroma pyramidale.
2074
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2074
Candidate Genes
C4H
5.89%
BAHD
5.72%
C3'H/CYP98A
5.7%
POD
4.03%
4CL
3.86%
CYP76
3.8%
F3H
3.61%
T3O
3.45%
Other Families
63.95%
More Families (97)
IFS
177
3.4%
UGT
160
3.07%
7DLGT
127
2.44%
UFGT
125
2.4%
NMT
121
2.32%
STR
112
2.15%
CAD
112
2.15%
F3'H/CYP75B
107
2.05%
DWF4/CYP90B1
104
2.0%
CODM/T6ODM
101
1.94%
BR6OX2/CYP85A2
94
1.8%
H6H
87
1.67%
LAC
83
1.59%
CYP71
79
1.52%
GS
73
1.4%
CAS
65
1.25%
SMT1/SMT2/SMT3
63
1.21%
IFR
57
1.09%
TPS
55
1.06%
CYP90D1
53
1.02%
PYKS
51
0.98%
GES
49
0.94%
TRI/TRII
48
0.92%
CSE
47
0.9%
HCT
47
0.9%
RAS
44
0.84%
T16H
43
0.83%
G8O/G8H
42
0.81%
BBE
41
0.79%
F5H/CYP84A
40
0.77%
PAL
39
0.75%
COMT
38
0.73%
PMT
37
0.71%
F3'5'H/CYP75A
37
0.71%
FNS
35
0.67%
IO
34
0.65%
NCS
34
0.65%
SGD
31
0.59%
BR6OX1/CYP85A1
31
0.59%
7DLH
30
0.58%
COR
27
0.52%
CCR
27
0.52%
CPD/CYP90A1
27
0.52%
ANR
26
0.5%
16OMT
22
0.42%
TAT
22
0.42%
8HGO
21
0.4%
DFR
21
0.4%
CHS
21
0.4%
SLS
20
0.38%
ROT3/CYP90C1
19
0.36%
LAMT
18
0.35%
ANS/LDOX
18
0.35%
CYP51G1
18
0.35%
CYP719
17
0.33%
MPO
17
0.33%
CNMT
15
0.29%
CPR
15
0.29%
CCoAOMT
14
0.27%
FPPS
13
0.25%
HMGR
11
0.21%
AACT
10
0.19%
DXS
10
0.19%
GGPPS
10
0.19%
SQS/FDFT1
9
0.17%
SMO1/SMO2
9
0.17%
MVD
9
0.17%
SQE
8
0.15%
CHI
7
0.13%
HPPR
7
0.13%
MVK
7
0.13%
CYP80B1
6
0.12%
ISY
6
0.12%
ODC
5
0.1%
ADC
5
0.1%
TDC
5
0.1%
FK
5
0.1%
DET2
5
0.1%
6OMT_4OMT_SOMT
4
0.08%
MDS/IspF
4
0.08%
HMGS
4
0.08%
XMT_MXMT_DXMT
3
0.06%
DWF1
3
0.06%
MCT/IspD
3
0.06%
PMK
3
0.06%
GPPS
3
0.06%
HDR/IspH
3
0.06%
DXR
3
0.06%
TYDC_DDC
2
0.04%
CPI1
2
0.04%
DWF7
2
0.04%
IDI
2
0.04%
HDS/IspG
2
0.04%
CMK/IspE
2
0.04%
FLS
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 574 | 21 | BAHD (232) | View species results |
| Phenylpropanoid pathway | 507 | 13 | POD (184) | View species results |
| Alkaloid pathway | 493 | 22 | NMT (64) | View species results |
| Flavonoid pathway | 225 | 10 | UFGT (110) | View species results |
| Rosmarinic acid pathway | 155 | 7 | C4H (53) | View species results |
| Steroid pathway | 120 | 11 | CAS (54) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1960 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 389 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| ochroma_pyramidale_OCHPYR00339_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR01245_OCHPYR | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| ochroma_pyramidale_OCHPYR01567_OCHPYR | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR02241_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR03561_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR03675_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR03814_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR03928_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR04073_OCHPYR | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR05506_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR06746_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR07104_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR07151_OCHPYR | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR07314_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR07315_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR07909_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR08613_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR08638_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR08700_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR08750_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR09232_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR09316_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10008_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10009_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10075_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10076_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10078_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR10595_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR11045_OCHPYR | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR11629_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR13110_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR13689_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR14173_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR14299_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR14314_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14316_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14317_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14320_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14322_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14326_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14329_OCHPYR | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14370_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR14598_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR14758_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR16360_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR16667_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR17180_OCHPYR | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ochroma_pyramidale_OCHPYR17315_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR17482_OCHPYR | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ochroma_pyramidale_OCHPYR18211_OCHPYR | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |