PlantSME Plant secondary metabolism enzyme database

Oldenlandia corymbosa (oldenlandia_corymbosa)

Imported from atlas release summary for Oldenlandia corymbosa.

1930
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.6% Alkaloid pathway 24.25% Phenylpropanoid pathway 19.22% Flavonoid pathway 11.5% Rosmarinic acid pathway 9.22% Steroid pathway 7.2%
Family Distribution
C3'H/CYP98A 6.56% C4H 6.46% BAHD 4.78% IFS 4.38% 4CL 3.89% T3O 3.81% UGT 3.79% CYP76 3.34%
Other Families 62.99%
More Families (96)
7DLGT 162 3.09% UFGT 153 2.92% F3H 149 2.84% POD 128 2.44% CYP71 128 2.44% DWF4/CYP90B1 115 2.19% F3'H/CYP75B 108 2.06% BR6OX2/CYP85A2 101 1.92% STR 100 1.91% CAD 100 1.91% NMT 89 1.7% CAS 89 1.7% CYP90D1 74 1.41% TPS 72 1.37% H6H 71 1.35% GES 71 1.35% SMT1/SMT2/SMT3 71 1.35% CODM/T6ODM 68 1.3% TRI/TRII 64 1.22% GS 57 1.09% LAC 56 1.07% SGD 55 1.05% T16H 50 0.95% 7DLH 49 0.93% HCT 48 0.91% BBE 47 0.9% COMT 47 0.9% CSE 43 0.82% TAT 43 0.82% NCS 40 0.76% G8O/G8H 40 0.76% LAMT 40 0.76% IFR 35 0.67% CPD/CYP90A1 35 0.67% SLS 34 0.65% FNS 34 0.65% PMT 33 0.63% PYKS 33 0.63% F3'5'H/CYP75A 33 0.63% COR 31 0.59% IO 31 0.59% CYP51G1 30 0.57% BR6OX1/CYP85A1 27 0.51% ANR 25 0.48% F5H/CYP84A 25 0.48% RAS 24 0.46% ROT3/CYP90C1 24 0.46% 16OMT 23 0.44% CCR 22 0.42% 8HGO 20 0.38% CNMT 20 0.38% DFR 14 0.27% CYP719 13 0.25% MPO 13 0.25% ISY 12 0.23% PAL 12 0.23% SQE 12 0.23% DXS 12 0.23% GGPPS 10 0.19% ANS/LDOX 8 0.15% CPR 8 0.15% SQS/FDFT1 8 0.15% FPPS 8 0.15% AACT 8 0.15% CHS 7 0.13% DET2 7 0.13% TDC 6 0.11% HPPR 6 0.11% CYP80B1 5 0.1% SMO1/SMO2 5 0.1% MVK 5 0.1% HDR/IspH 5 0.1% TYDC_DDC 4 0.08% XMT_MXMT_DXMT 4 0.08% FLS 4 0.08% CHI 4 0.08% MVD 4 0.08% CCoAOMT 3 0.06% DWF7 3 0.06% HMGS 3 0.06% HMGR 3 0.06% ADC 2 0.04% FK 2 0.04% DWF5 2 0.04% CPI1 2 0.04% MCT/IspD 2 0.04% PMK 2 0.04% CMK/IspE 2 0.04% CYP80F1 1 0.02% 6OMT_4OMT_SOMT 1 0.02% DWF1 1 0.02% HYD1 1 0.02% IDI 1 0.02% MDS/IspF 1 0.02% HDS/IspG 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 552 19 BAHD (188) View species results
Alkaloid pathway 468 23 7DLGT (61) View species results
Phenylpropanoid pathway 371 12 POD (119) View species results
Flavonoid pathway 222 10 UFGT (133) View species results
Rosmarinic acid pathway 178 7 C4H (78) View species results
Steroid pathway 139 12 CAS (65) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2211 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
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Gene Pathway Family Confidence Status
oldenlandia_corymbosa_CAI9091344.1 Terpenoid MVD medium pass
oldenlandia_corymbosa_CAI9091353.1 Terpenoid MVD low borderline
oldenlandia_corymbosa_CAI9091354.1 Terpenoid MVD low borderline
oldenlandia_corymbosa_CAI9113797.1 Terpenoid MVD low borderline