PlantSME Plant secondary metabolism enzyme database

Olea europaea (olea_europaea)

Imported from atlas release summary for Olea europaea.

2019
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.92% Alkaloid pathway 23.63% Phenylpropanoid pathway 18.08% Flavonoid pathway 12.93% Rosmarinic acid pathway 8.07% Steroid pathway 7.38%
Family Distribution
C4H 6.37% C3'H/CYP98A 5.86% BAHD 5.48% UGT 4.47% 7DLGT 3.99% UFGT 3.95% T3O 3.83% IFS 3.51%
Other Families 62.55%
More Families (96)
4CL 165 3.32% CYP76 159 3.2% POD 156 3.14% F3H 129 2.6% F3'H/CYP75B 114 2.3% DWF4/CYP90B1 106 2.14% CAD 105 2.12% NMT 95 1.91% CYP71 95 1.91% CODM/T6ODM 93 1.87% BR6OX2/CYP85A2 92 1.85% CAS 90 1.81% TPS 79 1.59% SMT1/SMT2/SMT3 77 1.55% GES 75 1.51% STR 65 1.31% H6H 62 1.25% LAC 59 1.19% SGD 57 1.15% TRI/TRII 55 1.11% CYP90D1 55 1.11% CSE 47 0.95% GS 46 0.93% BBE 44 0.89% IFR 44 0.89% PYKS 40 0.81% T16H 38 0.77% 7DLH 35 0.71% F5H/CYP84A 34 0.68% HCT 32 0.64% TAT 31 0.62% G8O/G8H 29 0.58% IO 29 0.58% PMT 29 0.58% ANS/LDOX 29 0.58% RAS 27 0.54% CPD/CYP90A1 27 0.54% CYP51G1 27 0.54% FNS 26 0.52% F3'5'H/CYP75A 25 0.5% SLS 24 0.48% PAL 24 0.48% 16OMT 23 0.46% COMT 23 0.46% ANR 22 0.44% 8HGO 18 0.36% NCS 18 0.36% CCR 18 0.36% CPR 18 0.36% LAMT 16 0.32% DFR 14 0.28% BR6OX1/CYP85A1 14 0.28% FPPS 14 0.28% MPO 12 0.24% SQE 12 0.24% AACT 12 0.24% GGPPS 12 0.24% COR 11 0.22% HPPR 10 0.2% ROT3/CYP90C1 10 0.2% SQS/FDFT1 10 0.2% SMO1/SMO2 9 0.18% ISY 8 0.16% CCoAOMT 8 0.16% HMGR 8 0.16% CYP719 7 0.14% CHS 7 0.14% TYDC_DDC 6 0.12% HYD1 6 0.12% MVD 6 0.12% DXS 6 0.12% CYP80B1 5 0.1% CNMT 5 0.1% CHI 5 0.1% MVK 5 0.1% HMGS 5 0.1% ADC 4 0.08% DET2 4 0.08% DWF1 4 0.08% HDR/IspH 4 0.08% DXR 4 0.08% IDI 4 0.08% XMT_MXMT_DXMT 3 0.06% CYP80F1 3 0.06% PMK 3 0.06% TDC 2 0.04% FLS 2 0.04% FK 2 0.04% DWF7 2 0.04% DWF5 2 0.04% CMK/IspE 2 0.04% HDS/IspG 2 0.04% GPPS 2 0.04% 6OMT_4OMT_SOMT 1 0.02% MDS/IspF 1 0.02% MCT/IspD 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 604 20 BAHD (210) View species results
Alkaloid pathway 477 24 7DLGT (106) View species results
Phenylpropanoid pathway 365 12 POD (144) View species results
Flavonoid pathway 261 12 UFGT (180) View species results
Rosmarinic acid pathway 163 7 C4H (70) View species results
Steroid pathway 149 11 CAS (62) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1899 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 331 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
Oeur03G0004180.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Oeur04G0003100.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Oeur15G0005440.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Oeur15G0017120.1 Flavonoid CHS medium pass CHS__00005__sp_O80400_VPS_HUMLU
Oeurscaffold12440018480.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Oeurscaffold12440018490.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Oeurscaffold1990067470.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA