PlantSME Plant secondary metabolism enzyme database

Olea europaea (olea_europaea)

Imported from atlas release summary for Olea europaea.

2346
Candidate Protein Records
2019
Pathway-Level Records
4964
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.92% Alkaloid pathway 23.63% Phenylpropanoid pathway 18.08% Flavonoid pathway 12.93% Rosmarinic acid pathway 8.07% Steroid pathway 7.38%
Family Distribution
C4H 6.37% C3'H/CYP98A 5.86% BAHD 5.48% UGT 4.47% 7DLGT 3.99% UFGT 3.95% T3O 3.83% IFS 3.51%
Other Families 62.55%
More Families (96)
4CL 165 3.32% CYP76 159 3.2% POD 156 3.14% F3H 129 2.6% F3'H/CYP75B 114 2.3% DWF4/CYP90B1 106 2.14% CAD 105 2.12% NMT 95 1.91% CYP71 95 1.91% CODM/T6ODM 93 1.87% BR6OX2/CYP85A2 92 1.85% CAS 90 1.81% TPS 79 1.59% SMT1/SMT2/SMT3 77 1.55% GES 75 1.51% STR 65 1.31% H6H 62 1.25% LAC 59 1.19% SGD 57 1.15% TRI/TRII 55 1.11% CYP90D1 55 1.11% CSE 47 0.95% GS 46 0.93% BBE 44 0.89% IFR 44 0.89% PYKS 40 0.81% T16H 38 0.77% 7DLH 35 0.71% F5H/CYP84A 34 0.68% HCT 32 0.64% TAT 31 0.62% G8O/G8H 29 0.58% IO 29 0.58% PMT 29 0.58% ANS/LDOX 29 0.58% RAS 27 0.54% CPD/CYP90A1 27 0.54% CYP51G1 27 0.54% FNS 26 0.52% F3'5'H/CYP75A 25 0.5% SLS 24 0.48% PAL 24 0.48% 16OMT 23 0.46% COMT 23 0.46% ANR 22 0.44% 8HGO 18 0.36% NCS 18 0.36% CCR 18 0.36% CPR 18 0.36% LAMT 16 0.32% DFR 14 0.28% BR6OX1/CYP85A1 14 0.28% FPPS 14 0.28% MPO 12 0.24% SQE 12 0.24% AACT 12 0.24% GGPPS 12 0.24% COR 11 0.22% HPPR 10 0.2% ROT3/CYP90C1 10 0.2% SQS/FDFT1 10 0.2% SMO1/SMO2 9 0.18% ISY 8 0.16% CCoAOMT 8 0.16% HMGR 8 0.16% CYP719 7 0.14% CHS 7 0.14% TYDC_DDC 6 0.12% HYD1 6 0.12% MVD 6 0.12% DXS 6 0.12% CYP80B1 5 0.1% CNMT 5 0.1% CHI 5 0.1% MVK 5 0.1% HMGS 5 0.1% ADC 4 0.08% DET2 4 0.08% DWF1 4 0.08% HDR/IspH 4 0.08% DXR 4 0.08% IDI 4 0.08% XMT_MXMT_DXMT 3 0.06% CYP80F1 3 0.06% PMK 3 0.06% TDC 2 0.04% FLS 2 0.04% FK 2 0.04% DWF7 2 0.04% DWF5 2 0.04% CMK/IspE 2 0.04% HDS/IspG 2 0.04% GPPS 2 0.04% 6OMT_4OMT_SOMT 1 0.02% MDS/IspF 1 0.02% MCT/IspD 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 604 20 BAHD (210) View species results
Alkaloid pathway 477 24 7DLGT (106) View species results
Phenylpropanoid pathway 365 12 POD (144) View species results
Flavonoid pathway 261 12 UFGT (180) View species results
Rosmarinic acid pathway 163 7 C4H (70) View species results
Steroid pathway 149 11 CAS (62) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1899 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 331 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
Oeurscaffold7090172530.1 Steroid DWF4/CYP90B1 low borderline
Oeurscaffold7160173170.1 Steroid DWF4/CYP90B1 low borderline
Oeurscaffold7750178300.1 Steroid DWF4/CYP90B1 low borderline
Oeurscaffold8710185360.1 Steroid DWF4/CYP90B1 low borderline
Oeurscaffold8890186400.1 Steroid DWF4/CYP90B1 low borderline
Oeurscaffold8890186500.1 Steroid DWF4/CYP90B1 low borderline