Olea europaea (olea_europaea)
Imported from atlas release summary for Olea europaea.
2019
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2019
Candidate Genes
C4H
6.37%
C3'H/CYP98A
5.86%
BAHD
5.48%
UGT
4.47%
7DLGT
3.99%
UFGT
3.95%
T3O
3.83%
IFS
3.51%
Other Families
62.55%
More Families (96)
4CL
165
3.32%
CYP76
159
3.2%
POD
156
3.14%
F3H
129
2.6%
F3'H/CYP75B
114
2.3%
DWF4/CYP90B1
106
2.14%
CAD
105
2.12%
NMT
95
1.91%
CYP71
95
1.91%
CODM/T6ODM
93
1.87%
BR6OX2/CYP85A2
92
1.85%
CAS
90
1.81%
TPS
79
1.59%
SMT1/SMT2/SMT3
77
1.55%
GES
75
1.51%
STR
65
1.31%
H6H
62
1.25%
LAC
59
1.19%
SGD
57
1.15%
TRI/TRII
55
1.11%
CYP90D1
55
1.11%
CSE
47
0.95%
GS
46
0.93%
BBE
44
0.89%
IFR
44
0.89%
PYKS
40
0.81%
T16H
38
0.77%
7DLH
35
0.71%
F5H/CYP84A
34
0.68%
HCT
32
0.64%
TAT
31
0.62%
G8O/G8H
29
0.58%
IO
29
0.58%
PMT
29
0.58%
ANS/LDOX
29
0.58%
RAS
27
0.54%
CPD/CYP90A1
27
0.54%
CYP51G1
27
0.54%
FNS
26
0.52%
F3'5'H/CYP75A
25
0.5%
SLS
24
0.48%
PAL
24
0.48%
16OMT
23
0.46%
COMT
23
0.46%
ANR
22
0.44%
8HGO
18
0.36%
NCS
18
0.36%
CCR
18
0.36%
CPR
18
0.36%
LAMT
16
0.32%
DFR
14
0.28%
BR6OX1/CYP85A1
14
0.28%
FPPS
14
0.28%
MPO
12
0.24%
SQE
12
0.24%
AACT
12
0.24%
GGPPS
12
0.24%
COR
11
0.22%
HPPR
10
0.2%
ROT3/CYP90C1
10
0.2%
SQS/FDFT1
10
0.2%
SMO1/SMO2
9
0.18%
ISY
8
0.16%
CCoAOMT
8
0.16%
HMGR
8
0.16%
CYP719
7
0.14%
CHS
7
0.14%
TYDC_DDC
6
0.12%
HYD1
6
0.12%
MVD
6
0.12%
DXS
6
0.12%
CYP80B1
5
0.1%
CNMT
5
0.1%
CHI
5
0.1%
MVK
5
0.1%
HMGS
5
0.1%
ADC
4
0.08%
DET2
4
0.08%
DWF1
4
0.08%
HDR/IspH
4
0.08%
DXR
4
0.08%
IDI
4
0.08%
XMT_MXMT_DXMT
3
0.06%
CYP80F1
3
0.06%
PMK
3
0.06%
TDC
2
0.04%
FLS
2
0.04%
FK
2
0.04%
DWF7
2
0.04%
DWF5
2
0.04%
CMK/IspE
2
0.04%
HDS/IspG
2
0.04%
GPPS
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
MDS/IspF
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 604 | 20 | BAHD (210) | View species results |
| Alkaloid pathway | 477 | 24 | 7DLGT (106) | View species results |
| Phenylpropanoid pathway | 365 | 12 | POD (144) | View species results |
| Flavonoid pathway | 261 | 12 | UFGT (180) | View species results |
| Rosmarinic acid pathway | 163 | 7 | C4H (70) | View species results |
| Steroid pathway | 149 | 11 | CAS (62) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1899 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 331 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Oeur23G0005360.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeur23G0005720.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeur23G0005780.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeur23G0005820.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeur23G0005850.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeur23G0005880.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold10040000320.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold10040000350.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold10120001310.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold11100008050.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold1190015160.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold12590019640.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold1260020130.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold12690020980.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold18320058290.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold18320058300.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold18780061110.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold22600083430.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold23350087660.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH |
| Oeurscaffold23670089130.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold24140091310.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH |
| Oeurscaffold24140091320.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH |
| Oeurscaffold24950095300.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold26680104110.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold313910122470.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH |
| Oeurscaffold325400125120.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Oeurscaffold43130144880.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |