Ophiorrhiza pumila (ophiorrhiza_pumila)
Imported from atlas release summary for Ophiorrhiza pumila.
1654
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1654
Candidate Genes
C4H
7.46%
C3'H/CYP98A
6.89%
BAHD
5.3%
T3O
4.25%
IFS
4.08%
UGT
3.9%
CYP76
3.62%
7DLGT
3.53%
Other Families
60.95%
More Families (95)
UFGT
154
3.36%
F3'H/CYP75B
134
2.92%
POD
129
2.81%
BR6OX2/CYP85A2
113
2.47%
CYP71
109
2.38%
4CL
105
2.29%
DWF4/CYP90B1
105
2.29%
F3H
99
2.16%
STR
98
2.14%
NMT
80
1.75%
SMT1/SMT2/SMT3
78
1.7%
SGD
66
1.44%
BBE
64
1.4%
CAD
63
1.37%
H6H
60
1.31%
CODM/T6ODM
59
1.29%
TRI/TRII
55
1.2%
CYP90D1
54
1.18%
CAS
53
1.16%
TAT
50
1.09%
T16H
47
1.03%
COMT
44
0.96%
G8O/G8H
41
0.89%
HCT
40
0.87%
GS
39
0.85%
GES
39
0.85%
TPS
39
0.85%
7DLH
37
0.81%
CSE
37
0.81%
IO
36
0.79%
SLS
35
0.76%
LAC
29
0.63%
F5H/CYP84A
29
0.63%
CYP51G1
28
0.61%
FNS
26
0.57%
IFR
26
0.57%
F3'5'H/CYP75A
25
0.55%
RAS
24
0.52%
NCS
23
0.5%
LAMT
23
0.5%
CPD/CYP90A1
23
0.5%
PYKS
22
0.48%
PMT
20
0.44%
16OMT
20
0.44%
ANR
19
0.41%
ANS/LDOX
15
0.33%
AACT
14
0.31%
DXR
14
0.31%
FPPS
14
0.31%
CNMT
13
0.28%
CCR
13
0.28%
COR
12
0.26%
PAL
12
0.26%
CPR
12
0.26%
BR6OX1/CYP85A1
12
0.26%
8HGO
11
0.24%
ROT3/CYP90C1
10
0.22%
FLS
9
0.2%
CCoAOMT
8
0.17%
TYDC_DDC
7
0.15%
DET2
7
0.15%
SQE
7
0.15%
MPO
6
0.13%
CYP80B1
6
0.13%
XMT_MXMT_DXMT
6
0.13%
DWF5
6
0.13%
CYP719
5
0.11%
DFR
5
0.11%
SMO1/SMO2
5
0.11%
MVK
5
0.11%
GGPPS
5
0.11%
HPPR
4
0.09%
SQS/FDFT1
4
0.09%
HMGR
4
0.09%
DXS
4
0.09%
HMGS
4
0.09%
ISY
3
0.07%
6OMT_4OMT_SOMT
3
0.07%
CHI
3
0.07%
CHS
3
0.07%
CMK/IspE
3
0.07%
MVD
3
0.07%
CPI1
2
0.04%
FK
2
0.04%
HDS/IspG
2
0.04%
MCT/IspD
2
0.04%
PMK
2
0.04%
ADC
1
0.02%
TDC
1
0.02%
HYD1
1
0.02%
DWF7
1
0.02%
GPPS
1
0.02%
HDR/IspH
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 503 | 19 | BAHD (190) | View species results |
| Alkaloid pathway | 402 | 24 | 7DLGT (62) | View species results |
| Phenylpropanoid pathway | 293 | 11 | POD (112) | View species results |
| Flavonoid pathway | 203 | 13 | UFGT (146) | View species results |
| Rosmarinic acid pathway | 137 | 7 | C4H (56) | View species results |
| Steroid pathway | 116 | 12 | SMT1/SMT2/SMT3 (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2055 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 307 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Opum05G0001560.1 | Terpenoid | CYP76 | low | borderline | CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF |
| Opum05G0001570.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Opum05G0001590.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Opum05G0002910.1 | Terpenoid | CYP76 | medium | pass | CYP76__00005__sp_A0A125QZE2_C76K1_SALMI |
| Opum05G0003670.1 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Opum05G0003790.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum05G0006690.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum05G0006830.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum05G0006870.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum05G0013170.1 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| Opum05G0013210.1 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| Opum05G0015930.1 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Opum06G0001450.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0001460.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0001490.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0001500.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Opum06G0001510.1 | Terpenoid | CYP76 | medium | pass | CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ |
| Opum06G0009830.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0012110.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Opum06G0025110.1 | Terpenoid | CYP76 | medium | pass | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Opum06G0026460.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Opum06G0026470.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Opum06G0026590.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0026600.1 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Opum06G0026670.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0026720.1 | Terpenoid | CYP76 | low | borderline | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Opum06G0026780.1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Opum06G0027270.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Opum06G0028340.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Opum06G0028810.1 | Terpenoid | CYP76 | medium | pass | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| Opum06G0029880.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Opum06G0029900.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Opum06G0029920.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Opum06G0030820.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Opum06G0030830.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0032210.1 | Terpenoid | CYP76 | low | borderline | CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ |
| Opum06G0035520.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0035530.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum06G0035540.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum07G0001160.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Opum07G0005170.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Opum07G0006050.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum07G0006060.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum07G0007160.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum07G0022400.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Opum07G0022660.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Opum07G0022670.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Opum07G0023120.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Opum07G0023140.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Opum07G0023150.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |