PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

2062
Candidate Protein Records
1654
Pathway-Level Records
4584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Opum05G0004290.1 Alkaloid T16H medium borderline
Opum06G0001490.1 Alkaloid T16H medium borderline
Opum06G0001510.1 Alkaloid T16H low borderline
Opum06G0009830.1 Alkaloid T16H medium borderline
Opum06G0016780.1 Alkaloid T16H low borderline
Opum06G0025110.1 Alkaloid T16H medium borderline
Opum06G0026460.1 Alkaloid T16H medium borderline
Opum06G0027290.1 Alkaloid T16H medium borderline
Opum06G0028810.1 Alkaloid T16H medium borderline
Opum06G0029880.1 Alkaloid T16H medium borderline
Opum07G0005170.1 Alkaloid T16H medium borderline
Opum07G0022860.1 Alkaloid T16H medium borderline
Opum07G0023270.1 Alkaloid T16H medium pass
Opum08G0006100.1 Alkaloid T16H medium borderline
Opum08G0006740.1 Alkaloid T16H medium borderline
Opum08G0006770.1 Alkaloid T16H medium borderline
Opum08G0015630.1 Alkaloid T16H low borderline
Opum08G0017430.1 Alkaloid T16H medium borderline
Opum09G0011850.1 Alkaloid T16H medium borderline
Opum09G0016920.1 Alkaloid T16H medium borderline
Opum09G0029000.1 Alkaloid T16H low borderline
Opum09G0029860.1 Alkaloid T16H medium borderline
Opum09G0033950.1 Alkaloid T16H medium borderline
Opum10G0004910.1 Alkaloid T16H medium borderline
Opum10G0007490.1 Alkaloid T16H medium borderline
Opum10G0007500.1 Alkaloid T16H medium borderline
Opum11G0006420.1 Alkaloid T16H medium borderline
Opum11G0015980.1 Alkaloid T16H low borderline
Opum11G0016020.1 Alkaloid T16H low borderline
Opum11G0018940.1 Alkaloid T16H low borderline
Opum11G0028930.1 Alkaloid T16H medium borderline
Opum01G0000310.1 Alkaloid T3O medium pass
Opum01G0000320.1 Alkaloid T3O medium pass
Opum01G0003100.1 Alkaloid T3O medium pass
Opum01G0006640.1 Alkaloid T3O medium borderline
Opum01G0006650.1 Alkaloid T3O medium borderline
Opum01G0008540.1 Alkaloid T3O medium borderline
Opum01G0008560.1 Alkaloid T3O medium borderline
Opum01G0008580.1 Alkaloid T3O medium borderline
Opum01G0008600.1 Alkaloid T3O medium borderline
Opum01G0008610.1 Alkaloid T3O medium borderline
Opum01G0008630.1 Alkaloid T3O medium borderline
Opum01G0008670.1 Alkaloid T3O medium borderline
Opum01G0008770.1 Alkaloid T3O medium borderline
Opum01G0008790.1 Alkaloid T3O medium borderline
Opum01G0008820.1 Alkaloid T3O medium borderline
Opum01G0008870.1 Alkaloid T3O medium borderline
Opum01G0008930.1 Alkaloid T3O medium borderline
Opum01G0008950.1 Alkaloid T3O medium borderline
Opum01G0008960.1 Alkaloid T3O medium borderline