Oropetium thomaeum (oropetium_thomaeum)
Imported from atlas release summary for Oropetium thomaeum.
1241
Candidate Protein Records
883
Pathway-Level Records
2033
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2033
Family-Level Calls
BAHD
8.41%
4CL
6.05%
POD
6.05%
UGT
5.46%
7DLGT
4.92%
UFGT
4.67%
NMT
3.2%
F3H
2.85%
Other Families
58.39%
More Families (95)
C3'H/CYP98A
58
2.85%
C4H
51
2.51%
STR
43
2.12%
H6H
38
1.87%
IFS
38
1.87%
SMT1/SMT2/SMT3
36
1.77%
LAC
32
1.57%
T3O
31
1.52%
PMT
30
1.48%
IFR
30
1.48%
CODM/T6ODM
29
1.43%
CAS
29
1.43%
PYKS
28
1.38%
CAD
27
1.33%
TRI/TRII
26
1.28%
CCR
26
1.28%
NCS
23
1.13%
RAS
22
1.08%
HCT
21
1.03%
COMT
21
1.03%
CYP76
21
1.03%
SGD
20
0.98%
SLS
19
0.93%
BR6OX2/CYP85A2
19
0.93%
GS
18
0.89%
16OMT
17
0.84%
DFR
17
0.84%
F3'H/CYP75B
16
0.79%
FNS
16
0.79%
ANR
16
0.79%
DWF4/CYP90B1
16
0.79%
7DLH
15
0.74%
BBE
15
0.74%
TPS
14
0.69%
IO
13
0.64%
CHS
13
0.64%
G8O/G8H
12
0.59%
ANS/LDOX
12
0.59%
COR
11
0.54%
CPR
11
0.54%
CYP90D1
11
0.54%
CYP71
11
0.54%
8HGO
10
0.49%
GES
10
0.49%
BR6OX1/CYP85A1
10
0.49%
CNMT
9
0.44%
GGPPS
9
0.44%
T16H
8
0.39%
F3'5'H/CYP75A
8
0.39%
TAT
8
0.39%
CPD/CYP90A1
8
0.39%
FPPS
8
0.39%
CSE
7
0.34%
AACT
7
0.34%
CYP51G1
6
0.3%
MPO
5
0.25%
CHI
5
0.25%
CCoAOMT
5
0.25%
HPPR
5
0.25%
HMGR
5
0.25%
DXS
5
0.25%
TYDC_DDC
4
0.2%
XMT_MXMT_DXMT
4
0.2%
LAMT
4
0.2%
SMO1/SMO2
4
0.2%
ROT3/CYP90C1
4
0.2%
SQS/FDFT1
4
0.2%
HYD1
4
0.2%
DET2
4
0.2%
MVK
4
0.2%
TDC
3
0.15%
F5H/CYP84A
3
0.15%
MCT/IspD
3
0.15%
IDI
3
0.15%
MDS/IspF
3
0.15%
6OMT_4OMT_SOMT
2
0.1%
ISY
2
0.1%
FLS
2
0.1%
PMK
2
0.1%
MVD
2
0.1%
HMGS
2
0.1%
CYP719
1
0.05%
ODC
1
0.05%
CYP80B1
1
0.05%
ADC
1
0.05%
SQE
1
0.05%
FK
1
0.05%
DWF7
1
0.05%
CPI1
1
0.05%
DWF5
1
0.05%
DWF1
1
0.05%
HDS/IspG
1
0.05%
DXR
1
0.05%
HDR/IspH
1
0.05%
CMK/IspE
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 251 | 20 | BAHD (117) | View species results |
| Alkaloid pathway | 206 | 22 | 7DLGT (38) | View species results |
| Phenylpropanoid pathway | 179 | 11 | POD (96) | View species results |
| Flavonoid pathway | 136 | 11 | UFGT (83) | View species results |
| Steroid pathway | 62 | 14 | CAS (23) | View species results |
| Rosmarinic acid pathway | 49 | 6 | 4CL (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 380 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 214 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Oropetium_20150105_26908A | Alkaloid | NMT | medium | pass |
| Oropetium_20150105_06499A | Alkaloid | ODC | medium | pass |
| Oropetium_20150105_03115A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_03143A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_05865A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_06145A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_06863A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_07296A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_07338A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_07339A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_08205A | Alkaloid | PMT | low | borderline |
| Oropetium_20150105_09416A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_09821A | Alkaloid | PMT | low | borderline |
| Oropetium_20150105_11483A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_14087A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_15457A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_15458A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_15460A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_15488A | Alkaloid | PMT | low | borderline |
| Oropetium_20150105_15489A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_16346A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_17539A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_17540A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_19012A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_19056A | Alkaloid | PMT | medium | borderline |
| Oropetium_20150105_19474A | Alkaloid | PMT | low | borderline |
| Oropetium_20150105_20053A | Alkaloid | PMT | low | borderline |
| Oropetium_20150105_24195A | Alkaloid | PMT | medium | borderline |
| Oropetium_20150105_27462A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_28060A | Alkaloid | PMT | medium | borderline |
| Oropetium_20150105_28404A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_28405A | Alkaloid | PMT | medium | pass |
| Oropetium_20150105_00164A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_00279A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_01848A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_03813A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_03849A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_04096A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_04605A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_05169A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_08952A | Alkaloid | PYKS | high | pass |
| Oropetium_20150105_13405A | Alkaloid | PYKS | high | pass |
| Oropetium_20150105_16032A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_16033A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_17525A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_18863A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_19705A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_19826A | Alkaloid | PYKS | high | pass |
| Oropetium_20150105_19893A | Alkaloid | PYKS | low | borderline |
| Oropetium_20150105_20639A | Alkaloid | PYKS | low | borderline |