PlantSME Plant secondary metabolism enzyme database

Oryza brachyantha (oryza_brachyantha)

Imported from atlas release summary for Oryza brachyantha.

1726
Candidate Protein Records
1473
Pathway-Level Records
3657
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 410 19 BAHD (143) View species results
Phenylpropanoid pathway 340 11 POD (176) View species results
Alkaloid pathway 326 25 7DLGT (67) View species results
Flavonoid pathway 193 13 UFGT (109) View species results
Rosmarinic acid pathway 128 7 C4H (64) View species results
Steroid pathway 76 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1498 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OB01G45270.1 Phenylpropanoid CSE medium pass
OB01G49830.1 Phenylpropanoid CSE medium pass
OB01G54590.1 Phenylpropanoid CSE medium pass
OB02G17440.1 Phenylpropanoid CSE medium pass
OB02G37270.1 Phenylpropanoid CSE medium pass
OB04G13200.1 Phenylpropanoid CSE medium pass
OB04G13330.1 Phenylpropanoid CSE medium pass
OB04G15860.1 Phenylpropanoid CSE medium pass
OB04G34510.1 Phenylpropanoid CSE medium pass
OB04G36020.1 Phenylpropanoid CSE medium pass
OB05G10660.1 Phenylpropanoid CSE medium pass
OB05G21470.1 Phenylpropanoid CSE medium pass
OB05G29740.1 Phenylpropanoid CSE medium pass
OB06G27030.1 Phenylpropanoid CSE medium pass
OB07G10600.1 Phenylpropanoid CSE medium pass
OB07G20330.1 Phenylpropanoid CSE medium pass
OB08G30140.1 Phenylpropanoid CSE medium pass
OB09G18340.1 Phenylpropanoid CSE medium pass
OB09G21690.1 Phenylpropanoid CSE medium pass
OB09G26320.1 Phenylpropanoid CSE low borderline
OB09G26390.1 Phenylpropanoid CSE medium pass
OB09G26450.1 Phenylpropanoid CSE medium pass
OB09G26460.1 Phenylpropanoid CSE medium pass
OB09G26480.1 Phenylpropanoid CSE medium pass
OB11G16830.1 Phenylpropanoid CSE medium pass
OB12G10170.1 Phenylpropanoid CSE low borderline
OB12G17130.1 Phenylpropanoid CSE medium pass
OB0072G10040.1 Phenylpropanoid F5H/CYP84A medium borderline
OB0116G10020.1 Phenylpropanoid F5H/CYP84A medium borderline
OB01G36940.1 Phenylpropanoid F5H/CYP84A medium borderline
OB02G15730.1 Phenylpropanoid F5H/CYP84A medium borderline
OB02G15780.1 Phenylpropanoid F5H/CYP84A medium borderline
OB02G15810.1 Phenylpropanoid F5H/CYP84A medium borderline
OB02G25360.1 Phenylpropanoid F5H/CYP84A medium borderline
OB02G30480.1 Phenylpropanoid F5H/CYP84A medium borderline
OB03G30660.1 Phenylpropanoid F5H/CYP84A medium borderline
OB03G31200.1 Phenylpropanoid F5H/CYP84A medium borderline
OB03G32590.1 Phenylpropanoid F5H/CYP84A medium borderline
OB04G11970.1 Phenylpropanoid F5H/CYP84A medium borderline
OB04G12330.1 Phenylpropanoid F5H/CYP84A medium borderline
OB05G30270.1 Phenylpropanoid F5H/CYP84A medium borderline
OB06G22260.1 Phenylpropanoid F5H/CYP84A medium borderline
OB08G10530.1 Phenylpropanoid F5H/CYP84A medium borderline
OB08G21530.1 Phenylpropanoid F5H/CYP84A medium borderline
OB09G12070.1 Phenylpropanoid F5H/CYP84A medium borderline
OB10G13440.1 Phenylpropanoid F5H/CYP84A medium borderline
OB10G15420.1 Phenylpropanoid F5H/CYP84A medium borderline
OB10G18690.1 Phenylpropanoid F5H/CYP84A medium borderline
OB12G17700.1 Phenylpropanoid F5H/CYP84A medium borderline
OB12G21240.1 Phenylpropanoid F5H/CYP84A medium borderline