PlantSME Plant secondary metabolism enzyme database

Ostrya chinensis (ostrya_chinensis)

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Imported from atlas release summary for Ostrya chinensis.

1756
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.26% Alkaloid pathway 22.15% Phenylpropanoid pathway 21.7% Flavonoid pathway 11.79% Rosmarinic acid pathway 7.29% Steroid pathway 5.81%
Family Distribution
C4H 6.38% BAHD 5.73% UGT 5.47% C3'H/CYP98A 5.16% CYP76 4.25% POD 3.87% 7DLGT 3.75% IFS 3.26%
Other Families 62.12%
More Families (97)
UFGT 131 3.07% 4CL 129 3.03% T3O 120 2.82% F3H 112 2.63% DWF4/CYP90B1 88 2.07% CODM/T6ODM 87 2.04% F3'H/CYP75B 85 1.99% NMT 82 1.92% CAD 80 1.88% STR 73 1.71% G8O/G8H 72 1.69% LAC 65 1.53% SMT1/SMT2/SMT3 56 1.31% T16H 55 1.29% TRI/TRII 55 1.29% H6H 54 1.27% FNS 54 1.27% BR6OX2/CYP85A2 54 1.27% HCT 51 1.2% IFR 48 1.13% COMT 48 1.13% CAS 48 1.13% F5H/CYP84A 40 0.94% GS 39 0.92% F3'5'H/CYP75A 39 0.92% IO 36 0.84% SGD 36 0.84% TPS 34 0.8% PMT 33 0.77% BR6OX1/CYP85A1 33 0.77% GES 32 0.75% ANR 31 0.73% CSE 31 0.73% TAT 31 0.73% CYP71 31 0.73% RAS 30 0.7% DFR 28 0.66% ANS/LDOX 28 0.66% PYKS 27 0.63% COR 24 0.56% 16OMT 24 0.56% CYP90D1 24 0.56% 7DLH 23 0.54% CCR 23 0.54% PAL 21 0.49% SLS 20 0.47% CYP80B1 16 0.38% MPO 16 0.38% 8HGO 15 0.35% CYP51G1 15 0.35% CPD/CYP90A1 13 0.31% NCS 12 0.28% CCoAOMT 12 0.28% LAMT 11 0.26% ROT3/CYP90C1 10 0.23% FPPS 10 0.23% 6OMT_4OMT_SOMT 9 0.21% ISY 9 0.21% AACT 9 0.21% CNMT 8 0.19% CHS 8 0.19% HPPR 7 0.16% SQS/FDFT1 7 0.16% GGPPS 7 0.16% ADC 6 0.14% CHI 5 0.12% CPR 5 0.12% HMGR 5 0.12% DXS 5 0.12% MVK 5 0.12% BBE 4 0.09% TDC 4 0.09% CYP719 3 0.07% TYDC_DDC 3 0.07% SQE 3 0.07% DWF1 3 0.07% SMO1/SMO2 3 0.07% MVD 3 0.07% MCT/IspD 3 0.07% DXR 3 0.07% CMK/IspE 3 0.07% XMT_MXMT_DXMT 2 0.05% HYD1 2 0.05% FK 2 0.05% DET2 2 0.05% PMK 2 0.05% HMGS 2 0.05% CYP80F1 1 0.02% ODC 1 0.02% FLS 1 0.02% DWF5 1 0.02% CPI1 1 0.02% DWF7 1 0.02% MDS/IspF 1 0.02% IDI 1 0.02% HDR/IspH 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 549 21 UGT (204) View species results
Alkaloid pathway 389 23 7DLGT (62) View species results
Phenylpropanoid pathway 381 12 POD (137) View species results
Flavonoid pathway 207 12 UFGT (111) View species results
Rosmarinic acid pathway 128 7 C4H (34) View species results
Steroid pathway 102 13 CAS (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1590 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
ostrya_chinensis_OmuG0002662.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0006315.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0006316.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0021095.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0021098.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0021882.1 Alkaloid LAMT low borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0021883.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0025954.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0026533.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0027288.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
ostrya_chinensis_OmuG0031064.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO