Ostrya chinensis (ostrya_chinensis)
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Imported from atlas release summary for Ostrya chinensis.
1756
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1756
Candidate Genes
C4H
6.38%
BAHD
5.73%
UGT
5.47%
C3'H/CYP98A
5.16%
CYP76
4.25%
POD
3.87%
7DLGT
3.75%
IFS
3.26%
Other Families
62.12%
More Families (97)
UFGT
131
3.07%
4CL
129
3.03%
T3O
120
2.82%
F3H
112
2.63%
DWF4/CYP90B1
88
2.07%
CODM/T6ODM
87
2.04%
F3'H/CYP75B
85
1.99%
NMT
82
1.92%
CAD
80
1.88%
STR
73
1.71%
G8O/G8H
72
1.69%
LAC
65
1.53%
SMT1/SMT2/SMT3
56
1.31%
T16H
55
1.29%
TRI/TRII
55
1.29%
H6H
54
1.27%
FNS
54
1.27%
BR6OX2/CYP85A2
54
1.27%
HCT
51
1.2%
IFR
48
1.13%
COMT
48
1.13%
CAS
48
1.13%
F5H/CYP84A
40
0.94%
GS
39
0.92%
F3'5'H/CYP75A
39
0.92%
IO
36
0.84%
SGD
36
0.84%
TPS
34
0.8%
PMT
33
0.77%
BR6OX1/CYP85A1
33
0.77%
GES
32
0.75%
ANR
31
0.73%
CSE
31
0.73%
TAT
31
0.73%
CYP71
31
0.73%
RAS
30
0.7%
DFR
28
0.66%
ANS/LDOX
28
0.66%
PYKS
27
0.63%
COR
24
0.56%
16OMT
24
0.56%
CYP90D1
24
0.56%
7DLH
23
0.54%
CCR
23
0.54%
PAL
21
0.49%
SLS
20
0.47%
CYP80B1
16
0.38%
MPO
16
0.38%
8HGO
15
0.35%
CYP51G1
15
0.35%
CPD/CYP90A1
13
0.31%
NCS
12
0.28%
CCoAOMT
12
0.28%
LAMT
11
0.26%
ROT3/CYP90C1
10
0.23%
FPPS
10
0.23%
6OMT_4OMT_SOMT
9
0.21%
ISY
9
0.21%
AACT
9
0.21%
CNMT
8
0.19%
CHS
8
0.19%
HPPR
7
0.16%
SQS/FDFT1
7
0.16%
GGPPS
7
0.16%
ADC
6
0.14%
CHI
5
0.12%
CPR
5
0.12%
HMGR
5
0.12%
DXS
5
0.12%
MVK
5
0.12%
BBE
4
0.09%
TDC
4
0.09%
CYP719
3
0.07%
TYDC_DDC
3
0.07%
SQE
3
0.07%
DWF1
3
0.07%
SMO1/SMO2
3
0.07%
MVD
3
0.07%
MCT/IspD
3
0.07%
DXR
3
0.07%
CMK/IspE
3
0.07%
XMT_MXMT_DXMT
2
0.05%
HYD1
2
0.05%
FK
2
0.05%
DET2
2
0.05%
PMK
2
0.05%
HMGS
2
0.05%
CYP80F1
1
0.02%
ODC
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 549 | 21 | UGT (204) | View species results |
| Alkaloid pathway | 389 | 23 | 7DLGT (62) | View species results |
| Phenylpropanoid pathway | 381 | 12 | POD (137) | View species results |
| Flavonoid pathway | 207 | 12 | UFGT (111) | View species results |
| Rosmarinic acid pathway | 128 | 7 | C4H (34) | View species results |
| Steroid pathway | 102 | 13 | CAS (44) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1590 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 325 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| ostrya_chinensis_OmuG0021698.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0021699.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0021742.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0021866.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0021943.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0022460.1 | Alkaloid | STR | medium | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0023470.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0024318.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0024347.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ostrya_chinensis_OmuG0024348.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| ostrya_chinensis_OmuG0025332.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0025334.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0025861.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0025996.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0025997.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0026863.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0027567.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0029140.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0029437.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0029528.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0030192.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0030383.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| ostrya_chinensis_OmuG0030628.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |