PlantSME Plant secondary metabolism enzyme database

Panax japonicus (panax_japonicus)

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Imported from atlas release summary for Panax japonicus.

2933
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 891 19 BAHD (343) View species results
Alkaloid pathway 619 23 NMT (106) View species results
Phenylpropanoid pathway 617 12 POD (272) View species results
Flavonoid pathway 356 12 UFGT (209) View species results
Rosmarinic acid pathway 251 7 C4H (63) View species results
Steroid pathway 199 14 CAS (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2288 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 555 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
panax_japonicus_GWHPBEIH043569.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
panax_japonicus_GWHPBEIH045612.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH045613.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH045711.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH045712.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
panax_japonicus_GWHPBEIH046170.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH046171.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH046218.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH046219.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH046298.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
panax_japonicus_GWHPBEIH046300.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
panax_japonicus_GWHPBEIH047515.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH050493.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH057735.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH057736.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH059031.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH059044.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH060059.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
panax_japonicus_GWHPBEIH060935.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH062192.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH063137.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH063138.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH065263.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH067557.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH069813.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH069815.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH070882.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
panax_japonicus_GWHPBEIH071634.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
panax_japonicus_GWHPBEIH071635.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
panax_japonicus_GWHPBEIH071812.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH