Panicum miliaceum (panicum_miliaceum)
Imported from atlas release summary for Panicum miliaceum.
3287
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3287
Candidate Genes
IO
10.47%
C4H
6.04%
C3'H/CYP98A
5.73%
BAHD
5.28%
POD
4.44%
IFS
3.5%
T3O
3.33%
UGT
3.33%
Other Families
57.87%
More Families (98)
CYP76
298
3.31%
4CL
297
3.3%
7DLGT
280
3.11%
UFGT
276
3.07%
DWF4/CYP90B1
207
2.3%
BR6OX2/CYP85A2
196
2.18%
F3'H/CYP75B
189
2.1%
NMT
179
1.99%
F3H
164
1.82%
CYP71
146
1.62%
STR
137
1.52%
CAS
121
1.34%
G8O/G8H
97
1.08%
SGD
93
1.03%
LAC
93
1.03%
SMT1/SMT2/SMT3
93
1.03%
H6H
91
1.01%
TPS
90
1.0%
SLS
81
0.9%
RAS
79
0.88%
PYKS
76
0.84%
HCT
76
0.84%
CAD
71
0.79%
CODM/T6ODM
70
0.78%
T16H
68
0.76%
GES
66
0.73%
CCR
66
0.73%
FNS
63
0.7%
CYP90D1
61
0.68%
PMT
59
0.66%
F5H/CYP84A
59
0.66%
IFR
57
0.63%
F3'5'H/CYP75A
57
0.63%
TRI/TRII
55
0.61%
SQS/FDFT1
55
0.61%
NCS
54
0.6%
ANR
51
0.57%
COR
47
0.52%
CSE
47
0.52%
COMT
44
0.49%
CYP51G1
43
0.48%
GS
42
0.47%
16OMT
41
0.46%
CPD/CYP90A1
40
0.44%
7DLH
37
0.41%
BR6OX1/CYP85A1
36
0.4%
8HGO
33
0.37%
PAL
33
0.37%
ANS/LDOX
30
0.33%
FPPS
30
0.33%
DFR
29
0.32%
BBE
28
0.31%
CHS
25
0.28%
TAT
24
0.27%
GGPPS
21
0.23%
CPR
20
0.22%
CNMT
19
0.21%
TYDC_DDC
18
0.2%
CCoAOMT
16
0.18%
SMO1/SMO2
15
0.17%
CYP80B1
14
0.16%
DXS
14
0.16%
MPO
13
0.14%
MVK
13
0.14%
MVD
13
0.14%
DWF1
12
0.13%
XMT_MXMT_DXMT
10
0.11%
LAMT
9
0.1%
HPPR
9
0.1%
AACT
9
0.1%
ROT3/CYP90C1
8
0.09%
MCT/IspD
8
0.09%
HMGS
7
0.08%
ODC
6
0.07%
CYP719
6
0.07%
CYP80F1
6
0.07%
DET2
6
0.07%
HYD1
6
0.07%
6OMT_4OMT_SOMT
5
0.06%
TDC
5
0.06%
HDR/IspH
5
0.06%
ADC
4
0.04%
FK
4
0.04%
SQE
3
0.03%
PMK
3
0.03%
ISY
2
0.02%
FLS
2
0.02%
CHI
2
0.02%
CPI1
2
0.02%
DWF7
2
0.02%
IDI
2
0.02%
DXR
2
0.02%
CMK/IspE
2
0.02%
HMGR
2
0.02%
MDS/IspF
2
0.02%
DWF5
1
0.01%
GPPS
1
0.01%
HDS/IspG
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 924 | 19 | BAHD (365) | View species results |
| Alkaloid pathway | 720 | 25 | 7DLGT (131) | View species results |
| Phenylpropanoid pathway | 711 | 13 | POD (376) | View species results |
| Flavonoid pathway | 410 | 13 | UFGT (256) | View species results |
| Rosmarinic acid pathway | 316 | 7 | C4H (153) | View species results |
| Steroid pathway | 206 | 13 | CAS (102) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4267 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 630 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pmil05G0022090.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0022130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0022140.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0022530.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0027610.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0028850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0036250.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil05G0038850.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil06G0003480.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil06G0030900.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil07G0015490.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0016620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0018450.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0020710.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil07G0021960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0021960.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0021960.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0021960.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0021960.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil07G0022790.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil07G0022870.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil08G0006390.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil08G0008920.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0015360.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0015360.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0016760.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0021510.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0021870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0021890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0021890.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0025720.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil08G0038540.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil09G0015350.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil09G0022400.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil09G0022440.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil10G0002330.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil10G0006630.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil10G0008350.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil10G0008380.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil10G0025350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil10G0030490.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil11G0004940.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil11G0009330.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil11G0009340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil11G0009370.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil11G0021440.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pmil11G0022560.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil11G0022560.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil11G0022570.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pmil11G0025600.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |