PlantSME Plant secondary metabolism enzyme database

Panicum miliaceum (panicum_miliaceum)

Imported from atlas release summary for Panicum miliaceum.

4786
Candidate Protein Records
3287
Pathway-Level Records
9003
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 19 BAHD (365) View species results
Alkaloid pathway 720 25 7DLGT (131) View species results
Phenylpropanoid pathway 711 13 POD (376) View species results
Flavonoid pathway 410 13 UFGT (256) View species results
Rosmarinic acid pathway 316 7 C4H (153) View species results
Steroid pathway 206 13 CAS (102) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4267 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 630 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pmil04G0008990.1 Terpenoid HDR/IspH high pass
Pmil04G0009000.1 Terpenoid HDR/IspH high pass
Pmil06G0006680.1 Terpenoid HDR/IspH low borderline
Pmil06G0015110.1 Terpenoid HDS/IspG high pass
Pmil06G0008380.1 Terpenoid HMGR medium pass
Pmil07G0008000.1 Terpenoid HMGR low borderline
Pmil01G0055400.1 Terpenoid HMGS high pass
Pmil02G0015120.1 Terpenoid HMGS medium pass
Pmil04G0050990.1 Terpenoid HMGS high pass
Pmil04G0050990.2 Terpenoid HMGS medium pass
Pmil11G0014400.1 Terpenoid HMGS high pass
Pmil11G0014400.2 Terpenoid HMGS medium pass
Pmil11G0014400.3 Terpenoid HMGS high pass
Pmil03G0024990.1 Terpenoid IDI medium pass
Pmil11G0033850.1 Terpenoid IDI low borderline
Pmil05G0039730.1 Terpenoid MCT/IspD high pass
Pmil09G0018290.1 Terpenoid MCT/IspD low borderline
Pmil13G0003670.1 Terpenoid MCT/IspD low borderline
Pmil13G0003670.2 Terpenoid MCT/IspD low borderline
Pmil14G0005880.1 Terpenoid MCT/IspD low borderline
Pmil15G0022260.1 Terpenoid MCT/IspD low borderline
Pmil17G0014490.1 Terpenoid MCT/IspD low borderline
Pmil18G0017000.1 Terpenoid MCT/IspD low borderline
Pmil06G0010550.1 Terpenoid MDS/IspF high pass
Pmil08G0000400.1 Terpenoid MDS/IspF low borderline
Pmil03G0041190.1 Terpenoid MVD medium pass
Pmil06G0002750.1 Terpenoid MVD medium pass
Pmil06G0002750.2 Terpenoid MVD medium pass
Pmil06G0002750.3 Terpenoid MVD medium pass
Pmil09G0016800.1 Terpenoid MVD low borderline
Pmil09G0016800.3 Terpenoid MVD low borderline
Pmil10G0002960.1 Terpenoid MVD low borderline
Pmil10G0037440.1 Terpenoid MVD medium pass
Pmil10G0037450.1 Terpenoid MVD medium pass
Pmil12G0032050.1 Terpenoid MVD medium pass
Pmil13G0016790.1 Terpenoid MVD low borderline
Pmil18G0015500.1 Terpenoid MVD low borderline
Pmil18G0015500.2 Terpenoid MVD low borderline
Pmil01G0002260.1 Terpenoid MVK low borderline
Pmil01G0002260.2 Terpenoid MVK low borderline
Pmil01G0002260.3 Terpenoid MVK low borderline
Pmil01G0050090.1 Terpenoid MVK low borderline
Pmil04G0002220.1 Terpenoid MVK low borderline
Pmil04G0021650.1 Terpenoid MVK low borderline
Pmil06G0000120.1 Terpenoid MVK low borderline
Pmil06G0000280.1 Terpenoid MVK low borderline
Pmil08G0026610.1 Terpenoid MVK medium pass
Pmil08G0026610.2 Terpenoid MVK medium pass
Pmil08G0026610.3 Terpenoid MVK medium pass
Pmil12G0025250.1 Terpenoid MVK low borderline