Panicum miliaceum (panicum_miliaceum)
Imported from atlas release summary for Panicum miliaceum.
4786
Candidate Protein Records
3287
Pathway-Level Records
9003
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
9003
Family-Level Calls
IO
10.47%
C4H
6.04%
C3'H/CYP98A
5.73%
BAHD
5.28%
POD
4.44%
IFS
3.5%
T3O
3.33%
UGT
3.33%
Other Families
57.87%
More Families (98)
CYP76
298
3.31%
4CL
297
3.3%
7DLGT
280
3.11%
UFGT
276
3.07%
DWF4/CYP90B1
207
2.3%
BR6OX2/CYP85A2
196
2.18%
F3'H/CYP75B
189
2.1%
NMT
179
1.99%
F3H
164
1.82%
CYP71
146
1.62%
STR
137
1.52%
CAS
121
1.34%
G8O/G8H
97
1.08%
SGD
93
1.03%
LAC
93
1.03%
SMT1/SMT2/SMT3
93
1.03%
H6H
91
1.01%
TPS
90
1.0%
SLS
81
0.9%
RAS
79
0.88%
PYKS
76
0.84%
HCT
76
0.84%
CAD
71
0.79%
CODM/T6ODM
70
0.78%
T16H
68
0.76%
GES
66
0.73%
CCR
66
0.73%
FNS
63
0.7%
CYP90D1
61
0.68%
PMT
59
0.66%
F5H/CYP84A
59
0.66%
IFR
57
0.63%
F3'5'H/CYP75A
57
0.63%
TRI/TRII
55
0.61%
SQS/FDFT1
55
0.61%
NCS
54
0.6%
ANR
51
0.57%
COR
47
0.52%
CSE
47
0.52%
COMT
44
0.49%
CYP51G1
43
0.48%
GS
42
0.47%
16OMT
41
0.46%
CPD/CYP90A1
40
0.44%
7DLH
37
0.41%
BR6OX1/CYP85A1
36
0.4%
8HGO
33
0.37%
PAL
33
0.37%
ANS/LDOX
30
0.33%
FPPS
30
0.33%
DFR
29
0.32%
BBE
28
0.31%
CHS
25
0.28%
TAT
24
0.27%
GGPPS
21
0.23%
CPR
20
0.22%
CNMT
19
0.21%
TYDC_DDC
18
0.2%
CCoAOMT
16
0.18%
SMO1/SMO2
15
0.17%
CYP80B1
14
0.16%
DXS
14
0.16%
MPO
13
0.14%
MVK
13
0.14%
MVD
13
0.14%
DWF1
12
0.13%
XMT_MXMT_DXMT
10
0.11%
LAMT
9
0.1%
HPPR
9
0.1%
AACT
9
0.1%
ROT3/CYP90C1
8
0.09%
MCT/IspD
8
0.09%
HMGS
7
0.08%
ODC
6
0.07%
CYP719
6
0.07%
CYP80F1
6
0.07%
DET2
6
0.07%
HYD1
6
0.07%
6OMT_4OMT_SOMT
5
0.06%
TDC
5
0.06%
HDR/IspH
5
0.06%
ADC
4
0.04%
FK
4
0.04%
SQE
3
0.03%
PMK
3
0.03%
ISY
2
0.02%
FLS
2
0.02%
CHI
2
0.02%
CPI1
2
0.02%
DWF7
2
0.02%
IDI
2
0.02%
DXR
2
0.02%
CMK/IspE
2
0.02%
HMGR
2
0.02%
MDS/IspF
2
0.02%
DWF5
1
0.01%
GPPS
1
0.01%
HDS/IspG
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 924 | 19 | BAHD (365) | View species results |
| Alkaloid pathway | 720 | 25 | 7DLGT (131) | View species results |
| Phenylpropanoid pathway | 711 | 13 | POD (376) | View species results |
| Flavonoid pathway | 410 | 13 | UFGT (256) | View species results |
| Rosmarinic acid pathway | 316 | 7 | C4H (153) | View species results |
| Steroid pathway | 206 | 13 | CAS (102) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4267 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 630 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pmil05G0010190.6 | Alkaloid | SGD | medium | pass |
| Pmil05G0040420.1 | Alkaloid | SGD | medium | pass |
| Pmil07G0010980.1 | Alkaloid | SGD | medium | pass |
| Pmil07G0025210.1 | Alkaloid | SGD | medium | pass |
| Pmil07G0025210.2 | Alkaloid | SGD | medium | pass |
| Pmil07G0028170.2 | Alkaloid | SGD | low | borderline |
| Pmil08G0004940.1 | Alkaloid | SGD | medium | pass |
| Pmil08G0010360.1 | Alkaloid | SGD | low | borderline |
| Pmil08G0010360.2 | Alkaloid | SGD | low | borderline |
| Pmil08G0010360.3 | Alkaloid | SGD | low | borderline |
| Pmil08G0033200.1 | Alkaloid | SGD | medium | pass |
| Pmil08G0033200.10 | Alkaloid | SGD | medium | pass |
| Pmil08G0033200.11 | Alkaloid | SGD | medium | pass |
| Pmil08G0033200.2 | Alkaloid | SGD | medium | pass |
| Pmil09G0003880.1 | Alkaloid | SGD | medium | pass |
| Pmil10G0026200.1 | Alkaloid | SGD | medium | pass |
| Pmil10G0026200.2 | Alkaloid | SGD | medium | pass |
| Pmil10G0026200.3 | Alkaloid | SGD | medium | pass |
| Pmil10G0026260.1 | Alkaloid | SGD | medium | pass |
| Pmil11G0015170.1 | Alkaloid | SGD | medium | pass |
| Pmil11G0016520.1 | Alkaloid | SGD | medium | pass |
| Pmil13G0015640.1 | Alkaloid | SGD | medium | pass |
| Pmil13G0015640.2 | Alkaloid | SGD | medium | pass |
| Pmil14G0012930.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012940.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012950.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012960.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012960.2 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.2 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.3 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.4 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.5 | Alkaloid | SGD | medium | pass |
| Pmil14G0012970.6 | Alkaloid | SGD | medium | pass |
| Pmil14G0012980.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0012980.2 | Alkaloid | SGD | medium | pass |
| Pmil14G0015740.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0015750.1 | Alkaloid | SGD | medium | pass |
| Pmil14G0015760.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0012980.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0012990.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0013190.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0013200.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0013210.1 | Alkaloid | SGD | medium | pass |
| Pmil15G0013210.2 | Alkaloid | SGD | medium | pass |
| Pmil15G0013220.1 | Alkaloid | SGD | low | borderline |
| Pmil15G0013220.10 | Alkaloid | SGD | medium | pass |
| Pmil15G0013220.2 | Alkaloid | SGD | low | borderline |
| Pmil15G0013220.5 | Alkaloid | SGD | medium | pass |
| Pmil15G0013220.6 | Alkaloid | SGD | medium | pass |