PlantSME Plant secondary metabolism enzyme database

Paraleucobryum enerve (paraleucobryum_enerve)

Imported from atlas release summary for Paraleucobryum enerve.

689
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.82% Terpenoid pathway 24.67% Alkaloid pathway 22.06% Flavonoid pathway 12.92% Rosmarinic acid pathway 9.58% Steroid pathway 5.95%
Family Distribution
C3'H/CYP98A 6.4% C4H 6.19% BAHD 5.17% POD 4.8% CYP76 4.59% 4CL 4.32% NMT 4.27% IFS 2.88%
Other Families 61.39%
More Families (95)
STR 51 2.72% UGT 46 2.45% 7DLGT 44 2.35% T3O 44 2.35% GS 41 2.19% F3'H/CYP75B 41 2.19% DWF4/CYP90B1 41 2.19% F3H 40 2.13% UFGT 39 2.08% BR6OX2/CYP85A2 39 2.08% IFR 35 1.87% CODM/T6ODM 28 1.49% PYKS 28 1.49% IO 26 1.39% F3'5'H/CYP75A 26 1.39% PAL 24 1.28% COMT 23 1.23% CHS 21 1.12% H6H 20 1.07% G8O/G8H 20 1.07% CYP71 20 1.07% CAD 19 1.01% SMT1/SMT2/SMT3 19 1.01% TRI/TRII 17 0.91% 16OMT 17 0.91% SGD 16 0.85% T16H 16 0.85% HCT 16 0.85% SLS 15 0.8% LAC 14 0.75% RAS 13 0.69% CAS 13 0.69% ANR 12 0.64% FNS 11 0.59% CSE 11 0.59% CYP90D1 11 0.59% CPR 10 0.53% SQS/FDFT1 10 0.53% COR 9 0.48% BR6OX1/CYP85A1 9 0.48% CPD/CYP90A1 9 0.48% CNMT 8 0.43% CCR 8 0.43% TDC 7 0.37% BBE 6 0.32% LAMT 6 0.32% NCS 6 0.32% CYP80B1 6 0.32% 8HGO 6 0.32% DFR 6 0.32% DWF5 6 0.32% AACT 6 0.32% 7DLH 5 0.27% PMT 5 0.27% CYP80F1 5 0.27% CYP719 5 0.27% ANS/LDOX 5 0.27% TAT 5 0.27% ROT3/CYP90C1 5 0.27% DET2 5 0.27% 6OMT_4OMT_SOMT 4 0.21% MPO 4 0.21% CHI 4 0.21% F5H/CYP84A 4 0.21% TPS 4 0.21% DXR 4 0.21% ADC 3 0.16% GES 3 0.16% MVD 3 0.16% GGPPS 3 0.16% MVK 3 0.16% HDS/IspG 3 0.16% TYDC_DDC 2 0.11% ISY 2 0.11% FLS 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% SQE 2 0.11% MCT/IspD 2 0.11% HMGS 2 0.11% FPPS 2 0.11% CMK/IspE 2 0.11% PMK 2 0.11% HPPR 1 0.05% HYD1 1 0.05% CPI1 1 0.05% DWF7 1 0.05% DWF1 1 0.05% FK 1 0.05% CYP51G1 1 0.05% HMGR 1 0.05% DXS 1 0.05% MDS/IspF 1 0.05% IDI 1 0.05% HDR/IspH 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 171 12 POD (76) View species results
Terpenoid pathway 170 19 BAHD (64) View species results
Alkaloid pathway 152 20 NMT (29) View species results
Flavonoid pathway 89 9 UFGT (33) View species results
Rosmarinic acid pathway 66 7 C4H (26) View species results
Steroid pathway 41 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 724 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
PeneHiC_scaffold_100058130 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_110089760 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_110101880 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_20165820 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
PeneHiC_scaffold_20172760 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
PeneHiC_scaffold_20180910 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
PeneHiC_scaffold_30207390 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PeneHiC_scaffold_40217580 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_40217660 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PeneHiC_scaffold_40217680 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_40217690 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PeneHiC_scaffold_50241850 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PeneHiC_scaffold_60299180 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PeneHiC_scaffold_90376210 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH