PlantSME Plant secondary metabolism enzyme database

Phalaenopsis aphrodite (phalaenopsis_aphrodite)

Imported from atlas release summary for Phalaenopsis aphrodite.

1049
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.31% Alkaloid pathway 22.02% Phenylpropanoid pathway 19.45% Flavonoid pathway 12.39% Rosmarinic acid pathway 8.01% Steroid pathway 7.82%
Family Distribution
C4H 6.67% C3'H/CYP98A 6.41% BAHD 5.75% 4CL 3.91% UGT 3.91% T3O 3.84% CYP76 3.72% 7DLGT 3.61%
Other Families 62.18%
More Families (95)
IFS 94 3.61% UFGT 89 3.41% POD 89 3.41% F3'H/CYP75B 64 2.45% DWF4/CYP90B1 60 2.3% NMT 58 2.22% CAD 55 2.11% F3H 53 2.03% BR6OX2/CYP85A2 51 1.96% STR 50 1.92% SMT1/SMT2/SMT3 50 1.92% CYP71 42 1.61% CAS 37 1.42% TPS 34 1.3% GS 32 1.23% GES 31 1.19% CODM/T6ODM 30 1.15% CYP90D1 29 1.11% H6H 28 1.07% G8O/G8H 27 1.04% LAC 26 1.0% TRI/TRII 25 0.96% IFR 25 0.96% 8HGO 24 0.92% PYKS 22 0.84% CSE 22 0.84% SLS 21 0.81% SGD 18 0.69% BBE 18 0.69% T16H 17 0.65% FNS 17 0.65% COMT 17 0.65% CYP51G1 17 0.65% CCR 16 0.61% RAS 16 0.61% PAL 15 0.58% ANR 14 0.54% F3'5'H/CYP75A 14 0.54% PMT 13 0.5% IO 13 0.5% 16OMT 12 0.46% F5H/CYP84A 12 0.46% HCT 12 0.46% CPD/CYP90A1 11 0.42% NCS 10 0.38% TAT 10 0.38% BR6OX1/CYP85A1 10 0.38% 7DLH 8 0.31% CNMT 8 0.31% ANS/LDOX 8 0.31% ROT3/CYP90C1 8 0.31% DFR 7 0.27% CPR 7 0.27% SQE 7 0.27% DET2 7 0.27% GGPPS 7 0.27% MPO 6 0.23% DXS 6 0.23% TYDC_DDC 5 0.19% CYP719 5 0.19% CHS 5 0.19% CCoAOMT 5 0.19% SQS/FDFT1 5 0.19% AACT 5 0.19% COR 4 0.15% CHI 4 0.15% HPPR 4 0.15% SMO1/SMO2 4 0.15% FPPS 4 0.15% MVD 3 0.12% MCT/IspD 3 0.12% CYP80B1 2 0.08% ADC 2 0.08% ISY 2 0.08% CYP80F1 2 0.08% XMT_MXMT_DXMT 2 0.08% DWF1 2 0.08% DWF7 2 0.08% HMGR 2 0.08% CMK/IspE 2 0.08% HDR/IspH 2 0.08% DXR 2 0.08% MVK 2 0.08% 6OMT_4OMT_SOMT 1 0.04% TDC 1 0.04% FLS 1 0.04% FK 1 0.04% CPI1 1 0.04% HYD1 1 0.04% DWF5 1 0.04% PMK 1 0.04% IDI 1 0.04% HMGS 1 0.04% HDS/IspG 1 0.04% MDS/IspF 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 318 20 BAHD (122) View species results
Alkaloid pathway 231 18 7DLGT (49) View species results
Phenylpropanoid pathway 204 11 POD (79) View species results
Flavonoid pathway 130 9 UFGT (83) View species results
Rosmarinic acid pathway 84 7 C4H (36) View species results
Steroid pathway 82 12 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1045 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 178 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Paphscaffold1000006160.1 Flavonoid IFR low borderline
Paphscaffold120026230.1 Flavonoid IFR low borderline
Paphscaffold1260033460.1 Flavonoid IFR low borderline
Paphscaffold13750043470.1 Flavonoid IFR low borderline
Paphscaffold160059660.1 Flavonoid IFR medium pass
Paphscaffold1720069510.1 Flavonoid IFR low borderline
Paphscaffold20088200.1 Flavonoid IFR low borderline
Paphscaffold2270103150.1 Flavonoid IFR low borderline
Paphscaffold2400109740.1 Flavonoid IFR high pass
Paphscaffold2400109750.1 Flavonoid IFR high pass
Paphscaffold260118760.1 Flavonoid IFR low borderline
Paphscaffold320147420.1 Flavonoid IFR low borderline
Paphscaffold320147760.1 Flavonoid IFR high pass
Paphscaffold3660163290.1 Flavonoid IFR low borderline
Paphscaffold380168010.1 Flavonoid IFR low borderline
Paphscaffold390171870.1 Flavonoid IFR low borderline
Paphscaffold440188250.1 Flavonoid IFR low borderline
Paphscaffold4590192780.1 Flavonoid IFR high pass
Paphscaffold4690195610.1 Flavonoid IFR low borderline
Paphscaffold580221170.1 Flavonoid IFR low borderline
Paphscaffold590223430.1 Flavonoid IFR high pass
Paphscaffold590223440.1 Flavonoid IFR high pass
Paphscaffold640233470.1 Flavonoid IFR low borderline
Paphscaffold810264690.1 Flavonoid IFR low borderline
Paphscaffold820266140.1 Flavonoid IFR low borderline