Piper longum (piper_longum)
Imported from atlas release summary for Piper longum.
1869
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1869
Candidate Genes
C4H
6.7%
BAHD
5.14%
C3'H/CYP98A
4.9%
POD
3.85%
CYP76
3.75%
4CL
3.6%
UGT
3.34%
IFS
3.23%
Other Families
65.5%
More Families (97)
7DLGT
131
2.8%
NMT
123
2.63%
UFGT
119
2.55%
TPS
108
2.31%
F3'H/CYP75B
100
2.14%
DWF4/CYP90B1
98
2.1%
T3O
96
2.05%
F3H
87
1.86%
STR
85
1.82%
G8O/G8H
83
1.78%
GES
81
1.73%
COMT
80
1.71%
CAS
73
1.56%
H6H
70
1.5%
T16H
69
1.48%
CAD
68
1.46%
PAL
57
1.22%
CSE
55
1.18%
CNMT
54
1.16%
PYKS
52
1.11%
16OMT
50
1.07%
BR6OX2/CYP85A2
49
1.05%
CODM/T6ODM
48
1.03%
CYP71
48
1.03%
FNS
47
1.01%
TRI/TRII
46
0.98%
NCS
43
0.92%
F5H/CYP84A
43
0.92%
SMT1/SMT2/SMT3
43
0.92%
IFR
40
0.86%
LAC
39
0.83%
F3'5'H/CYP75A
38
0.81%
SGD
37
0.79%
ANS/LDOX
37
0.79%
HCT
35
0.75%
CYP90D1
35
0.75%
PMT
31
0.66%
GS
30
0.64%
RAS
30
0.64%
SLS
29
0.62%
CPD/CYP90A1
25
0.54%
7DLH
24
0.51%
MPO
22
0.47%
CCR
22
0.47%
CYP719
21
0.45%
BBE
21
0.45%
CHS
21
0.45%
8HGO
19
0.41%
CYP80B1
19
0.41%
TYDC_DDC
19
0.41%
ANR
19
0.41%
BR6OX1/CYP85A1
19
0.41%
TAT
18
0.39%
IO
17
0.36%
DFR
17
0.36%
LAMT
16
0.34%
CPR
16
0.34%
FPPS
14
0.3%
6OMT_4OMT_SOMT
13
0.28%
ODC
12
0.26%
SQS/FDFT1
12
0.26%
COR
11
0.24%
XMT_MXMT_DXMT
11
0.24%
GGPPS
11
0.24%
CCoAOMT
10
0.21%
ROT3/CYP90C1
10
0.21%
FLS
9
0.19%
AACT
9
0.19%
TDC
8
0.17%
HPPR
7
0.15%
DWF7
7
0.15%
DET2
7
0.15%
DXS
7
0.15%
MVD
6
0.13%
MVK
6
0.13%
SMO1/SMO2
5
0.11%
CMK/IspE
5
0.11%
MCT/IspD
5
0.11%
ISY
4
0.09%
CHI
4
0.09%
DWF1
4
0.09%
SQE
4
0.09%
IDI
4
0.09%
HMGR
4
0.09%
CYP80F1
3
0.06%
ADC
3
0.06%
HDS/IspG
3
0.06%
HDR/IspH
3
0.06%
HMGS
3
0.06%
CYP51G1
2
0.04%
DWF5
2
0.04%
FK
2
0.04%
CPI1
2
0.04%
MDS/IspF
2
0.04%
DXR
2
0.04%
HYD1
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 568 | 20 | BAHD (186) | View species results |
| Alkaloid pathway | 452 | 27 | GES (67) | View species results |
| Phenylpropanoid pathway | 407 | 13 | POD (156) | View species results |
| Flavonoid pathway | 233 | 12 | UFGT (101) | View species results |
| Rosmarinic acid pathway | 120 | 7 | 4CL (38) | View species results |
| Steroid pathway | 89 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1696 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 305 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| PL01G0014130 | Alkaloid | PMT | low | borderline |
| PL02G0050530 | Alkaloid | PMT | medium | pass |
| PL02G0060250 | Alkaloid | PMT | low | borderline |
| PL03G0094010 | Alkaloid | PMT | medium | pass |
| PL03G0094070 | Alkaloid | PMT | medium | pass |
| PL03G0094150 | Alkaloid | PMT | low | borderline |
| PL03G0094700 | Alkaloid | PMT | medium | pass |
| PL05G0134730 | Alkaloid | PMT | low | borderline |
| PL05G0137180 | Alkaloid | PMT | low | borderline |
| PL05G0143220 | Alkaloid | PMT | medium | pass |
| PL05G0162670 | Alkaloid | PMT | medium | pass |
| PL06G0165840 | Alkaloid | PMT | medium | pass |
| PL06G0168820 | Alkaloid | PMT | medium | pass |
| PL06G0188720 | Alkaloid | PMT | medium | pass |
| PL06G0188750 | Alkaloid | PMT | medium | pass |
| PL06G0193030 | Alkaloid | PMT | low | borderline |
| PL06G0196090 | Alkaloid | PMT | medium | pass |
| PL08G0233160 | Alkaloid | PMT | low | borderline |
| PL12G0305670 | Alkaloid | PMT | medium | borderline |
| PL12G0311800 | Alkaloid | PMT | low | borderline |
| PL17G0389860 | Alkaloid | PMT | medium | borderline |
| PL17G0394690 | Alkaloid | PMT | medium | pass |
| PL17G0394740 | Alkaloid | PMT | medium | pass |
| PL18G0405160 | Alkaloid | PMT | medium | borderline |
| PL18G0412140 | Alkaloid | PMT | low | borderline |
| PL21G0454960 | Alkaloid | PMT | medium | pass |
| PL21G0455020 | Alkaloid | PMT | low | borderline |
| PL23G0469750 | Alkaloid | PMT | medium | pass |
| PL25G0502470 | Alkaloid | PMT | medium | borderline |
| PL26G0509960 | Alkaloid | PMT | medium | borderline |
| PL26G0509980 | Alkaloid | PMT | medium | borderline |