PlantSME Plant secondary metabolism enzyme database

Piper longum (piper_longum)

Imported from atlas release summary for Piper longum.

1869
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.39% Alkaloid pathway 24.18% Phenylpropanoid pathway 21.78% Flavonoid pathway 12.47% Rosmarinic acid pathway 6.42% Steroid pathway 4.76%
Family Distribution
C4H 6.7% BAHD 5.14% C3'H/CYP98A 4.9% POD 3.85% CYP76 3.75% 4CL 3.6% UGT 3.34% IFS 3.23%
Other Families 65.5%
More Families (97)
7DLGT 131 2.8% NMT 123 2.63% UFGT 119 2.55% TPS 108 2.31% F3'H/CYP75B 100 2.14% DWF4/CYP90B1 98 2.1% T3O 96 2.05% F3H 87 1.86% STR 85 1.82% G8O/G8H 83 1.78% GES 81 1.73% COMT 80 1.71% CAS 73 1.56% H6H 70 1.5% T16H 69 1.48% CAD 68 1.46% PAL 57 1.22% CSE 55 1.18% CNMT 54 1.16% PYKS 52 1.11% 16OMT 50 1.07% BR6OX2/CYP85A2 49 1.05% CODM/T6ODM 48 1.03% CYP71 48 1.03% FNS 47 1.01% TRI/TRII 46 0.98% NCS 43 0.92% F5H/CYP84A 43 0.92% SMT1/SMT2/SMT3 43 0.92% IFR 40 0.86% LAC 39 0.83% F3'5'H/CYP75A 38 0.81% SGD 37 0.79% ANS/LDOX 37 0.79% HCT 35 0.75% CYP90D1 35 0.75% PMT 31 0.66% GS 30 0.64% RAS 30 0.64% SLS 29 0.62% CPD/CYP90A1 25 0.54% 7DLH 24 0.51% MPO 22 0.47% CCR 22 0.47% CYP719 21 0.45% BBE 21 0.45% CHS 21 0.45% 8HGO 19 0.41% CYP80B1 19 0.41% TYDC_DDC 19 0.41% ANR 19 0.41% BR6OX1/CYP85A1 19 0.41% TAT 18 0.39% IO 17 0.36% DFR 17 0.36% LAMT 16 0.34% CPR 16 0.34% FPPS 14 0.3% 6OMT_4OMT_SOMT 13 0.28% ODC 12 0.26% SQS/FDFT1 12 0.26% COR 11 0.24% XMT_MXMT_DXMT 11 0.24% GGPPS 11 0.24% CCoAOMT 10 0.21% ROT3/CYP90C1 10 0.21% FLS 9 0.19% AACT 9 0.19% TDC 8 0.17% HPPR 7 0.15% DWF7 7 0.15% DET2 7 0.15% DXS 7 0.15% MVD 6 0.13% MVK 6 0.13% SMO1/SMO2 5 0.11% CMK/IspE 5 0.11% MCT/IspD 5 0.11% ISY 4 0.09% CHI 4 0.09% DWF1 4 0.09% SQE 4 0.09% IDI 4 0.09% HMGR 4 0.09% CYP80F1 3 0.06% ADC 3 0.06% HDS/IspG 3 0.06% HDR/IspH 3 0.06% HMGS 3 0.06% CYP51G1 2 0.04% DWF5 2 0.04% FK 2 0.04% CPI1 2 0.04% MDS/IspF 2 0.04% DXR 2 0.04% HYD1 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 568 20 BAHD (186) View species results
Alkaloid pathway 452 27 GES (67) View species results
Phenylpropanoid pathway 407 13 POD (156) View species results
Flavonoid pathway 233 12 UFGT (101) View species results
Rosmarinic acid pathway 120 7 4CL (38) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1696 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
PL22G0465660 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
PL22G0465670 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
PL25G0500960 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
PL25G0502500 Terpenoid TPS medium pass TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
PL26G0509860 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
PL26G0509940 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
PL26G0511350 Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
PL26G0511930 Terpenoid TPS medium pass TPS__00017__sp_A0A1V0E4A6_TPS2_PIPNI