Pisum sativum (pisum_sativum)
Imported from atlas release summary for Pisum sativum.
2142
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2142
Candidate Genes
C3'H/CYP98A
5.42%
BAHD
5.42%
C4H
5.22%
4CL
4.67%
IFS
3.84%
UGT
3.69%
7DLGT
3.46%
UFGT
3.44%
Other Families
64.86%
More Families (97)
POD
169
3.25%
CYP76
168
3.23%
NMT
166
3.19%
F3H
162
3.11%
T3O
149
2.86%
DWF4/CYP90B1
121
2.32%
CAD
118
2.27%
SGD
112
2.15%
STR
99
1.9%
CODM/T6ODM
92
1.77%
CAS
91
1.75%
H6H
84
1.61%
BR6OX2/CYP85A2
84
1.61%
F3'H/CYP75B
81
1.56%
SMT1/SMT2/SMT3
73
1.4%
TRI/TRII
71
1.36%
IFR
70
1.34%
TPS
63
1.21%
GES
60
1.15%
GS
55
1.06%
CYP71
52
1.0%
T16H
51
0.98%
MPO
46
0.88%
PAL
45
0.86%
CYP90D1
44
0.85%
LAC
41
0.79%
PMT
40
0.77%
7DLH
39
0.75%
HCT
39
0.75%
CSE
37
0.71%
RAS
36
0.69%
ANR
35
0.67%
COMT
35
0.67%
BBE
33
0.63%
8HGO
30
0.58%
F3'5'H/CYP75A
29
0.56%
AACT
29
0.56%
PYKS
28
0.54%
IO
26
0.5%
ROT3/CYP90C1
26
0.5%
COR
25
0.48%
G8O/G8H
25
0.48%
SLS
24
0.46%
FNS
23
0.44%
NCS
22
0.42%
CCR
22
0.42%
LAMT
21
0.4%
TAT
21
0.4%
BR6OX1/CYP85A1
19
0.36%
CPD/CYP90A1
19
0.36%
CCoAOMT
18
0.35%
CPR
17
0.33%
CYP51G1
17
0.33%
ANS/LDOX
16
0.31%
F5H/CYP84A
16
0.31%
CNMT
15
0.29%
SQE
15
0.29%
SQS/FDFT1
15
0.29%
DXS
14
0.27%
16OMT
13
0.25%
DFR
13
0.25%
CYP719
10
0.19%
HPPR
9
0.17%
MVD
9
0.17%
DET2
8
0.15%
GGPPS
8
0.15%
CYP80B1
7
0.13%
DWF7
7
0.13%
CHI
6
0.12%
DWF1
6
0.12%
SMO1/SMO2
6
0.12%
FPPS
6
0.12%
MVK
6
0.12%
TYDC_DDC
5
0.1%
XMT_MXMT_DXMT
5
0.1%
PMK
5
0.1%
HMGR
5
0.1%
DXR
5
0.1%
TDC
4
0.08%
DWF5
4
0.08%
ISY
3
0.06%
ADC
3
0.06%
FLS
3
0.06%
HYD1
3
0.06%
CMK/IspE
3
0.06%
IDI
3
0.06%
MCT/IspD
3
0.06%
6OMT_4OMT_SOMT
2
0.04%
CYP80F1
2
0.04%
FK
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDR/IspH
2
0.04%
ODC
1
0.02%
CHS
1
0.02%
CPI1
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 574 | 22 | SGD (98) | View species results |
| Terpenoid pathway | 572 | 19 | BAHD (227) | View species results |
| Phenylpropanoid pathway | 405 | 11 | POD (154) | View species results |
| Flavonoid pathway | 276 | 9 | UFGT (171) | View species results |
| Rosmarinic acid pathway | 160 | 7 | 4CL (50) | View species results |
| Steroid pathway | 155 | 14 | CAS (75) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1763 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 357 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Psat07G0025600.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0025600.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0025600.3 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0029620.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0034350.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0040850.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0044090.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0045310.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0045310.2 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0054410.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psat07G0054430.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold011320012120.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold019530022120.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold019530022120.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold019530022120.3 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold019720022430.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold021930025120.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold024460028310.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold027070031790.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold027070031790.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold038150045100.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline | SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH |
| Psatscaffold050690053360.1 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT |
| Psatscaffold050690053360.2 | Steroid | SMT1/SMT2/SMT3 | medium | pass | SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT |