PlantSME Plant secondary metabolism enzyme database

Plantago major (plantago_major)

Imported from atlas release summary for Plantago major.

1599
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.77% Alkaloid pathway 22.01% Phenylpropanoid pathway 19.39% Flavonoid pathway 15.45% Rosmarinic acid pathway 6.07% Steroid pathway 5.32%
Family Distribution
C4H 7.58% C3'H/CYP98A 5.41% UGT 5.29% 7DLGT 4.94% BAHD 4.86% UFGT 4.81% CYP76 4.56% POD 3.72%
Other Families 58.82%
More Families (96)
IFS 148 3.69% 4CL 123 3.07% T3O 116 2.89% F3H 100 2.49% F3'H/CYP75B 84 2.1% NMT 79 1.97% DWF4/CYP90B1 78 1.95% CODM/T6ODM 76 1.9% G8O/G8H 71 1.77% STR 68 1.7% CAD 68 1.7% SMT1/SMT2/SMT3 55 1.37% BR6OX2/CYP85A2 54 1.35% LAC 40 1.0% FNS 39 0.97% CSE 39 0.97% TRI/TRII 37 0.92% CYP90D1 37 0.92% BBE 36 0.9% F5H/CYP84A 36 0.9% ANR 35 0.87% CPD/CYP90A1 35 0.87% TPS 35 0.87% GS 34 0.85% T16H 34 0.85% CYP71 34 0.85% GES 33 0.82% H6H 32 0.8% IFR 32 0.8% F3'5'H/CYP75A 32 0.8% CAS 31 0.77% IO 30 0.75% SGD 30 0.75% SLS 29 0.72% PYKS 25 0.62% RAS 23 0.57% CYP80B1 21 0.52% CCR 21 0.52% TAT 21 0.52% PMT 20 0.5% COMT 20 0.5% 7DLH 19 0.47% HCT 19 0.47% 16OMT 18 0.45% DFR 18 0.45% CCoAOMT 16 0.4% 8HGO 15 0.37% NCS 14 0.35% COR 13 0.32% BR6OX1/CYP85A1 13 0.32% GGPPS 13 0.32% AACT 12 0.3% HMGR 12 0.3% LAMT 11 0.27% ANS/LDOX 11 0.27% CNMT 10 0.25% MPO 9 0.22% ISY 9 0.22% PAL 9 0.22% FPPS 9 0.22% ADC 7 0.17% MVK 7 0.17% CYP719 6 0.15% CPR 6 0.15% HPPR 6 0.15% CYP51G1 6 0.15% DXS 6 0.15% CHS 5 0.12% ROT3/CYP90C1 5 0.12% SQE 5 0.12% XMT_MXMT_DXMT 4 0.1% SQS/FDFT1 4 0.1% TYDC_DDC 3 0.07% CYP80F1 3 0.07% CHI 3 0.07% DWF7 3 0.07% SMO1/SMO2 3 0.07% HMGS 3 0.07% PMK 3 0.07% MCT/IspD 3 0.07% MVD 3 0.07% TDC 2 0.05% HYD1 2 0.05% FK 2 0.05% CPI1 2 0.05% DET2 2 0.05% HDR/IspH 2 0.05% CMK/IspE 2 0.05% GPPS 2 0.05% FLS 1 0.02% DWF1 1 0.02% DWF5 1 0.02% HDS/IspG 1 0.02% MDS/IspF 1 0.02% DXR 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 UGT (194) View species results
Alkaloid pathway 352 20 7DLGT (99) View species results
Phenylpropanoid pathway 310 12 POD (144) View species results
Flavonoid pathway 247 12 UFGT (184) View species results
Rosmarinic acid pathway 97 7 C4H (34) View species results
Steroid pathway 85 12 SMT1/SMT2/SMT3 (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 237 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
Reset
Gene Pathway Family Confidence Status Best Target
plantago_major_evm.model.Contig474.7 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG01.4032 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG02.2229 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG02.654 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
plantago_major_evm.model.LG03.1060 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG03.1477 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG03.3041 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG03.5120 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG04.2111 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG04.2112 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG04.2468 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG04.3745 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
plantago_major_evm.model.LG05.4047 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
plantago_major_evm.model.LG06.3382 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO