Poncirus trifoliata (poncirus_trifoliata)
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Imported from atlas release summary for Poncirus trifoliata.
1711
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1711
Candidate Genes
C3'H/CYP98A
6.8%
C4H
6.67%
BAHD
5.3%
CYP76
4.77%
IFS
4.17%
T3O
4.15%
UGT
3.71%
7DLGT
3.36%
Other Families
61.08%
More Families (96)
UFGT
149
3.29%
NMT
134
2.96%
F3H
128
2.83%
POD
127
2.8%
4CL
123
2.72%
DWF4/CYP90B1
115
2.54%
F3'H/CYP75B
108
2.38%
BR6OX2/CYP85A2
105
2.32%
CODM/T6ODM
102
2.25%
COMT
79
1.74%
STR
75
1.66%
CYP71
67
1.48%
CYP90D1
65
1.43%
CAS
59
1.3%
HCT
58
1.28%
TRI/TRII
52
1.15%
TAT
50
1.1%
H6H
49
1.08%
BBE
48
1.06%
RAS
45
0.99%
G8O/G8H
43
0.95%
TPS
42
0.93%
GES
41
0.91%
SMT1/SMT2/SMT3
40
0.88%
CAD
37
0.82%
T16H
36
0.79%
PYKS
34
0.75%
IFR
34
0.75%
IO
32
0.71%
LAMT
30
0.66%
16OMT
30
0.66%
LAC
30
0.66%
PMT
28
0.62%
GS
26
0.57%
F3'5'H/CYP75A
26
0.57%
ANS/LDOX
24
0.53%
PAL
24
0.53%
F5H/CYP84A
24
0.53%
FNS
23
0.51%
SGD
22
0.49%
ISY
22
0.49%
CPD/CYP90A1
22
0.49%
COR
21
0.46%
CSE
20
0.44%
7DLH
19
0.42%
CCR
19
0.42%
ANR
16
0.35%
SLS
15
0.33%
NCS
14
0.31%
8HGO
14
0.31%
CHS
14
0.31%
CYP51G1
12
0.26%
GGPPS
12
0.26%
AACT
10
0.22%
CNMT
9
0.2%
TYDC_DDC
9
0.2%
CYP80B1
9
0.2%
MPO
9
0.2%
DFR
9
0.2%
CCoAOMT
9
0.2%
CYP719
8
0.18%
CPR
7
0.15%
BR6OX1/CYP85A1
7
0.15%
FPPS
7
0.15%
ODC
6
0.13%
HPPR
6
0.13%
SQE
6
0.13%
SQS/FDFT1
5
0.11%
MVK
5
0.11%
XMT_MXMT_DXMT
4
0.09%
ROT3/CYP90C1
4
0.09%
HYD1
4
0.09%
DXS
4
0.09%
MVD
4
0.09%
6OMT_4OMT_SOMT
3
0.07%
CHI
3
0.07%
DET2
3
0.07%
DXR
3
0.07%
MCT/IspD
3
0.07%
TDC
2
0.04%
FLS
2
0.04%
DWF7
2
0.04%
SMO1/SMO2
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
HMGS
2
0.04%
HMGR
2
0.04%
PMK
2
0.04%
HDR/IspH
2
0.04%
ADC
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 485 | 19 | BAHD (190) | View species results |
| Alkaloid pathway | 401 | 23 | 7DLGT (81) | View species results |
| Phenylpropanoid pathway | 329 | 11 | POD (120) | View species results |
| Flavonoid pathway | 213 | 11 | UFGT (139) | View species results |
| Rosmarinic acid pathway | 191 | 7 | C4H (78) | View species results |
| Steroid pathway | 92 | 11 | CAS (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1920 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 343 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| poncirus_trifoliata_Pt3g026230.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt3g026240.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt3g026260.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt3g026300.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt3g026450.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| poncirus_trifoliata_Pt3g028770.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| poncirus_trifoliata_Pt3g030130.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| poncirus_trifoliata_Pt3g033680.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| poncirus_trifoliata_Pt3g034470.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt3g035890.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| poncirus_trifoliata_Pt3g039210.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| poncirus_trifoliata_Pt4g000180.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| poncirus_trifoliata_Pt4g001610.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| poncirus_trifoliata_Pt4g004340.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| poncirus_trifoliata_Pt4g008370.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| poncirus_trifoliata_Pt4g010290.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| poncirus_trifoliata_Pt4g011020.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| poncirus_trifoliata_Pt4g014190.1 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| poncirus_trifoliata_Pt4g017220.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt4g017290.1 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt4g021960.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| poncirus_trifoliata_Pt5g000050.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| poncirus_trifoliata_Pt5g001330.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| poncirus_trifoliata_Pt5g002820.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| poncirus_trifoliata_Pt5g006180.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| poncirus_trifoliata_Pt5g007160.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| poncirus_trifoliata_Pt5g007180.1 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt5g007190.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| poncirus_trifoliata_Pt5g007610.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| poncirus_trifoliata_Pt5g007730.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| poncirus_trifoliata_Pt5g008930.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| poncirus_trifoliata_Pt5g017220.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| poncirus_trifoliata_Pt5g019270.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| poncirus_trifoliata_Pt5g021360.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| poncirus_trifoliata_Pt5g022810.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| poncirus_trifoliata_Pt5g025950.1 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| poncirus_trifoliata_Pt6g005950.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| poncirus_trifoliata_Pt6g016410.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| poncirus_trifoliata_Pt6g017320.1 | Alkaloid | NMT | low | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| poncirus_trifoliata_Pt7g002460.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| poncirus_trifoliata_Pt7g002480.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| poncirus_trifoliata_Pt7g002500.1 | Alkaloid | NMT | medium | pass | NMT__00051__sp_Q96565_AMNMT_HORVV |
| poncirus_trifoliata_Pt7g003940.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| poncirus_trifoliata_Pt7g005880.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| poncirus_trifoliata_Pt7g005950.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| poncirus_trifoliata_Pt7g017190.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| poncirus_trifoliata_Pt7g018190.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| poncirus_trifoliata_Pt7g019060.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| poncirus_trifoliata_Pt7g019490.1 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| poncirus_trifoliata_Pt7g019500.1 | Alkaloid | NMT | medium | pass | NMT__00062__sp_Q9SCP7_NAMT1_ARATH |