PlantSME Plant secondary metabolism enzyme database

Populus tremula x alba (populus_tremula_x_alba)

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Imported from atlas release summary for Populus tremula x alba.

1994
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 603 19 BAHD (228) View species results
Alkaloid pathway 445 21 7DLGT (101) View species results
Phenylpropanoid pathway 373 12 POD (149) View species results
Flavonoid pathway 280 10 UFGT (194) View species results
Rosmarinic acid pathway 176 7 C4H (66) View species results
Steroid pathway 117 13 CAS (50) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1697 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 390 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
populus_tremula_x_alba_PtXaTreH.01G354500.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.01G354600.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.02G152900.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.02G153000.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.04G039600.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.04G039700.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.05G138000.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.09G116800.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.09G116900.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.11G046200.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.11G046300.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.11G122400.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.12G003400.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098100.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098400.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098500.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098600.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098700.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098900.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G099200.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G099400.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G112100.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G112200.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G112300.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.14G020800.1.p Alkaloid 16OMT low borderline
populus_tremula_x_alba_PtXaTreH.14G082600.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.14G082700.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.15G002400.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.19G085200.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.19G085300.1.p Alkaloid 16OMT medium borderline
populus_tremula_x_alba_PtXaTreH.13G098800.1.p Alkaloid 6OMT_4OMT_SOMT medium borderline
populus_tremula_x_alba_PtXaTreH.01G013600.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G013700.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G013800.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G026000.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G111600.1.p Alkaloid 7DLGT medium pass
populus_tremula_x_alba_PtXaTreH.01G111700.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G202700.1.p Alkaloid 7DLGT medium pass
populus_tremula_x_alba_PtXaTreH.01G232600.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G232700.1.p Alkaloid 7DLGT medium pass
populus_tremula_x_alba_PtXaTreH.01G232900.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G249100.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G249200.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G249500.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G249600.1.p Alkaloid 7DLGT high pass
populus_tremula_x_alba_PtXaTreH.01G249700.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G249900.1.p Alkaloid 7DLGT low borderline
populus_tremula_x_alba_PtXaTreH.01G256500.1.p Alkaloid 7DLGT medium pass
populus_tremula_x_alba_PtXaTreH.01G256600.1.p Alkaloid 7DLGT medium pass
populus_tremula_x_alba_PtXaTreH.01G257000.1.p Alkaloid 7DLGT medium pass