PlantSME Plant secondary metabolism enzyme database

Populus tremula x alba (populus_tremula_x_alba)

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Imported from atlas release summary for Populus tremula x alba.

1994
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 603 19 BAHD (228) View species results
Alkaloid pathway 445 21 7DLGT (101) View species results
Phenylpropanoid pathway 373 12 POD (149) View species results
Flavonoid pathway 280 10 UFGT (194) View species results
Rosmarinic acid pathway 176 7 C4H (66) View species results
Steroid pathway 117 13 CAS (50) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1697 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 390 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
populus_tremula_x_alba_PtXaTreH.01G253600.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.01G253700.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.01G336000.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.01G336100.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.02G044500.1.p Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
populus_tremula_x_alba_PtXaTreH.04G021300.1.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
populus_tremula_x_alba_PtXaTreH.04G028300.1.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
populus_tremula_x_alba_PtXaTreH.05G073000.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.05G073100.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.05G073200.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.05G160300.1.p Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
populus_tremula_x_alba_PtXaTreH.07G063800.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.07G098100.1.p Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
populus_tremula_x_alba_PtXaTreH.07G098300.1.p Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
populus_tremula_x_alba_PtXaTreH.07G099400.1.p Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
populus_tremula_x_alba_PtXaTreH.07G099600.1.p Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
populus_tremula_x_alba_PtXaTreH.08G064900.1.p Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
populus_tremula_x_alba_PtXaTreH.11G025400.1.p Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
populus_tremula_x_alba_PtXaTreH.11G025500.1.p Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
populus_tremula_x_alba_PtXaTreH.11G025600.1.p Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
populus_tremula_x_alba_PtXaTreH.11G026000.1.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
populus_tremula_x_alba_PtXaTreH.11G026100.1.p Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
populus_tremula_x_alba_PtXaTreH.11G026200.1.p Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
populus_tremula_x_alba_PtXaTreH.11G105800.1.p Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
populus_tremula_x_alba_PtXaTreH.11G116000.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.15G024000.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.15G024200.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.15G067800.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.15G068000.1.p Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
populus_tremula_x_alba_PtXaTreH.17G029900.1.p Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
populus_tremula_x_alba_PtXaTreH.19G012000.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.19G012100.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.19G012200.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.19G012300.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.19G012400.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.19G012500.1.p Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
populus_tremula_x_alba_PtXaTreH.19G022800.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.19G022900.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.19G023300.1.p Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
populus_tremula_x_alba_PtXaTreH.19G023400.1.p Terpenoid TPS medium pass TPS__00005__sp_A0A140KFG9_TPS1_CAMBE