PlantSME Plant secondary metabolism enzyme database

Porella chinensis (porella_chinensis)

Imported from atlas release summary for Porella chinensis.

670
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 27.91% Alkaloid pathway 20.45% Terpenoid pathway 20.3% Rosmarinic acid pathway 13.13% Flavonoid pathway 12.24% Steroid pathway 5.97%
Family Distribution
C4H 8.73% C3'H/CYP98A 6.15% CYP76 5.66% BAHD 4.85% POD 4.64% 4CL 4.2% IFS 4.04% NMT 3.23%
Other Families 58.49%
More Families (96)
STR 53 2.86% T16H 41 2.21% BR6OX2/CYP85A2 40 2.16% PAL 39 2.1% T3O 37 1.99% UGT 37 1.99% DWF4/CYP90B1 35 1.89% IFR 33 1.78% F3H 32 1.73% GS 31 1.67% COMT 31 1.67% BR6OX1/CYP85A1 28 1.51% TRI/TRII 26 1.4% IO 26 1.4% F3'H/CYP75B 25 1.35% PYKS 24 1.29% HCT 24 1.29% RAS 23 1.24% 7DLGT 21 1.13% CHS 21 1.13% UFGT 20 1.08% CAD 19 1.02% H6H 18 0.97% CAS 18 0.97% F3'5'H/CYP75A 16 0.86% SMT1/SMT2/SMT3 16 0.86% COR 14 0.75% CPD/CYP90A1 14 0.75% CYP71 14 0.75% LAC 12 0.65% CSE 12 0.65% F5H/CYP84A 12 0.65% TPS 12 0.65% SGD 11 0.59% 16OMT 11 0.59% CODM/T6ODM 11 0.59% CYP719 10 0.54% G8O/G8H 10 0.54% 8HGO 9 0.49% FNS 9 0.49% SLS 8 0.43% TAT 8 0.43% CYP90D1 8 0.43% CNMT 7 0.38% PMT 7 0.38% SQS/FDFT1 7 0.38% NCS 6 0.32% LAMT 6 0.32% ANR 6 0.32% HPPR 6 0.32% ISY 5 0.27% MPO 5 0.27% GES 5 0.27% CCR 5 0.27% CPR 5 0.27% GGPPS 5 0.27% 7DLH 4 0.22% 6OMT_4OMT_SOMT 4 0.22% DFR 4 0.22% CCoAOMT 4 0.22% CYP51G1 4 0.22% DET2 4 0.22% MCT/IspD 4 0.22% ADC 3 0.16% CYP80B1 3 0.16% BBE 3 0.16% XMT_MXMT_DXMT 3 0.16% TDC 3 0.16% CHI 3 0.16% ANS/LDOX 3 0.16% DWF1 3 0.16% SMO1/SMO2 3 0.16% ROT3/CYP90C1 3 0.16% AACT 3 0.16% FPPS 3 0.16% MVK 3 0.16% PMK 2 0.11% DXR 2 0.11% MVD 2 0.11% HDR/IspH 2 0.11% ODC 1 0.05% TYDC_DDC 1 0.05% FLS 1 0.05% DWF7 1 0.05% SQE 1 0.05% CPI1 1 0.05% FK 1 0.05% HYD1 1 0.05% DWF5 1 0.05% IDI 1 0.05% HDS/IspG 1 0.05% CMK/IspE 1 0.05% MDS/IspF 1 0.05% GPPS 1 0.05% HMGS 1 0.05% DXS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 187 12 POD (79) View species results
Alkaloid pathway 137 18 NMT (22) View species results
Terpenoid pathway 136 18 BAHD (51) View species results
Rosmarinic acid pathway 88 7 C4H (44) View species results
Flavonoid pathway 82 12 CHS (21) View species results
Steroid pathway 40 13 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 794 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 137 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
Pchi1077830015160 Phenylpropanoid CAD medium pass
Pchi1243680032950 Phenylpropanoid CAD low borderline
Pchi1263890041880 Phenylpropanoid CAD low borderline
Pchi1269180047270 Phenylpropanoid CAD medium pass
Pchi1460170085870 Phenylpropanoid CAD low borderline
Pchi1480990091660 Phenylpropanoid CAD low borderline
Pchi1584170112810 Phenylpropanoid CAD low borderline
Pchi1584960113260 Phenylpropanoid CAD medium pass
Pchi1617510122120 Phenylpropanoid CAD medium borderline
Pchi1621580125290 Phenylpropanoid CAD medium borderline
Pchi1632760136350 Phenylpropanoid CAD medium pass
Pchi1649700144100 Phenylpropanoid CAD medium pass
Pchi1683640187590 Phenylpropanoid CAD low borderline
Pchi1697780236550 Phenylpropanoid CAD medium pass
Pchi1700610251360 Phenylpropanoid CAD low borderline
Pchi1702730263800 Phenylpropanoid CAD low borderline
Pchi1706100297030 Phenylpropanoid CAD medium borderline
Pchi1711150344400 Phenylpropanoid CAD medium pass
Pchi814680358390 Phenylpropanoid CAD medium borderline