PlantSME Plant secondary metabolism enzyme database

Porella platyphylla (porella_platyphylla)

Imported from atlas release summary for Porella platyphylla.

572
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.57% Terpenoid pathway 23.43% Alkaloid pathway 22.03% Rosmarinic acid pathway 11.36% Flavonoid pathway 11.19% Steroid pathway 5.42%
Family Distribution
C4H 8.99% C3'H/CYP98A 5.89% CYP76 5.38% BAHD 5.13% POD 4.62% 4CL 3.8% STR 3.36% NMT 3.23%
Other Families 59.59%
More Families (95)
IFS 51 3.23% F3H 47 2.98% BR6OX2/CYP85A2 47 2.98% T16H 38 2.41% H6H 34 2.15% IFR 32 2.03% T3O 29 1.84% GS 28 1.77% UGT 28 1.77% F3'H/CYP75B 27 1.71% 7DLGT 26 1.65% UFGT 26 1.65% IO 22 1.39% HCT 22 1.39% TRI/TRII 21 1.33% DWF4/CYP90B1 20 1.27% RAS 18 1.14% COMT 17 1.08% CAD 16 1.01% SMT1/SMT2/SMT3 16 1.01% BR6OX1/CYP85A1 15 0.95% CODM/T6ODM 14 0.89% PYKS 14 0.89% LAC 13 0.82% TPS 13 0.82% PAL 12 0.76% CYP90D1 12 0.76% CYP71 12 0.76% F3'5'H/CYP75A 11 0.7% CHS 11 0.7% CPD/CYP90A1 11 0.7% FPPS 10 0.63% SGD 9 0.57% G8O/G8H 9 0.57% CSE 9 0.57% CAS 9 0.57% COR 8 0.51% ANR 8 0.51% LAMT 7 0.44% CNMT 7 0.44% 8HGO 7 0.44% FNS 7 0.44% TAT 7 0.44% GES 6 0.38% SLS 6 0.38% PMT 6 0.38% F5H/CYP84A 6 0.38% GGPPS 6 0.38% 16OMT 5 0.32% CYP719 5 0.32% ISY 5 0.32% CYP80B1 5 0.32% CCR 5 0.32% MPO 4 0.25% DFR 4 0.25% CCoAOMT 4 0.25% CPR 4 0.25% ROT3/CYP90C1 4 0.25% NCS 3 0.19% ADC 3 0.19% CHI 3 0.19% SQS/FDFT1 3 0.19% SMO1/SMO2 3 0.19% AACT 3 0.19% MCT/IspD 3 0.19% 7DLH 2 0.13% BBE 2 0.13% TDC 2 0.13% ANS/LDOX 2 0.13% FLS 2 0.13% CYP51G1 2 0.13% SQE 2 0.13% DET2 2 0.13% HYD1 2 0.13% DWF1 2 0.13% MVD 2 0.13% MVK 2 0.13% DXS 2 0.13% HMGR 2 0.13% DXR 2 0.13% ODC 1 0.06% CYP80F1 1 0.06% 6OMT_4OMT_SOMT 1 0.06% XMT_MXMT_DXMT 1 0.06% DWF7 1 0.06% FK 1 0.06% CPI1 1 0.06% DWF5 1 0.06% MDS/IspF 1 0.06% HDS/IspG 1 0.06% HDR/IspH 1 0.06% HMGS 1 0.06% IDI 1 0.06% CMK/IspE 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 152 11 POD (70) View species results
Terpenoid pathway 134 19 BAHD (51) View species results
Alkaloid pathway 126 20 NMT (21) View species results
Rosmarinic acid pathway 65 6 C4H (40) View species results
Flavonoid pathway 64 10 UFGT (23) View species results
Steroid pathway 31 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 121 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Ppla1454760002010 Terpenoid TPS medium pass TPS__00163__sp_Q675L5_TPSD2_PICAB
Ppla1576580007540 Terpenoid TPS low borderline TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Ppla2103690031030 Terpenoid TPS low borderline TPS__00131__sp_J9QS23_TPS9_SELML
Ppla2129240034510 Terpenoid TPS medium pass TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Ppla2391680059820 Terpenoid TPS medium pass TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Ppla2403210064820 Terpenoid TPS medium pass TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Ppla2420420072200 Terpenoid TPS low borderline TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Ppla2447140085040 Terpenoid TPS low borderline TPS__00120__sp_G9MAN7_TPS4_SELML
Ppla2494930134570 Terpenoid TPS medium pass TPS__00109__sp_F2XFB2_LEVOS_PICSI
Ppla2495680136720 Terpenoid TPS medium pass TPS__00131__sp_J9QS23_TPS9_SELML
Ppla2495680136730 Terpenoid TPS medium pass TPS__00109__sp_F2XFB2_LEVOS_PICSI
Ppla2509770162210 Terpenoid TPS low borderline TPS__00144__sp_M4HY08_MPIM1_PINBN
Ppla2512990170100 Terpenoid TPS medium pass TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO