PlantSME Plant secondary metabolism enzyme database

Porella platyphylla (porella_platyphylla)

Imported from atlas release summary for Porella platyphylla.

795
Candidate Protein Records
572
Pathway-Level Records
1579
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 26.57% Terpenoid pathway 23.43% Alkaloid pathway 22.03% Rosmarinic acid pathway 11.36% Flavonoid pathway 11.19% Steroid pathway 5.42%
Family Distribution
C4H 8.99% C3'H/CYP98A 5.89% CYP76 5.38% BAHD 5.13% POD 4.62% 4CL 3.8% STR 3.36% NMT 3.23%
Other Families 59.59%
More Families (95)
IFS 51 3.23% F3H 47 2.98% BR6OX2/CYP85A2 47 2.98% T16H 38 2.41% H6H 34 2.15% IFR 32 2.03% T3O 29 1.84% GS 28 1.77% UGT 28 1.77% F3'H/CYP75B 27 1.71% 7DLGT 26 1.65% UFGT 26 1.65% IO 22 1.39% HCT 22 1.39% TRI/TRII 21 1.33% DWF4/CYP90B1 20 1.27% RAS 18 1.14% COMT 17 1.08% CAD 16 1.01% SMT1/SMT2/SMT3 16 1.01% BR6OX1/CYP85A1 15 0.95% CODM/T6ODM 14 0.89% PYKS 14 0.89% LAC 13 0.82% TPS 13 0.82% PAL 12 0.76% CYP90D1 12 0.76% CYP71 12 0.76% F3'5'H/CYP75A 11 0.7% CHS 11 0.7% CPD/CYP90A1 11 0.7% FPPS 10 0.63% SGD 9 0.57% G8O/G8H 9 0.57% CSE 9 0.57% CAS 9 0.57% COR 8 0.51% ANR 8 0.51% LAMT 7 0.44% CNMT 7 0.44% 8HGO 7 0.44% FNS 7 0.44% TAT 7 0.44% GES 6 0.38% SLS 6 0.38% PMT 6 0.38% F5H/CYP84A 6 0.38% GGPPS 6 0.38% 16OMT 5 0.32% CYP719 5 0.32% ISY 5 0.32% CYP80B1 5 0.32% CCR 5 0.32% MPO 4 0.25% DFR 4 0.25% CCoAOMT 4 0.25% CPR 4 0.25% ROT3/CYP90C1 4 0.25% NCS 3 0.19% ADC 3 0.19% CHI 3 0.19% SQS/FDFT1 3 0.19% SMO1/SMO2 3 0.19% AACT 3 0.19% MCT/IspD 3 0.19% 7DLH 2 0.13% BBE 2 0.13% TDC 2 0.13% ANS/LDOX 2 0.13% FLS 2 0.13% CYP51G1 2 0.13% SQE 2 0.13% DET2 2 0.13% HYD1 2 0.13% DWF1 2 0.13% MVD 2 0.13% MVK 2 0.13% DXS 2 0.13% HMGR 2 0.13% DXR 2 0.13% ODC 1 0.06% CYP80F1 1 0.06% 6OMT_4OMT_SOMT 1 0.06% XMT_MXMT_DXMT 1 0.06% DWF7 1 0.06% FK 1 0.06% CPI1 1 0.06% DWF5 1 0.06% MDS/IspF 1 0.06% HDS/IspG 1 0.06% HDR/IspH 1 0.06% HMGS 1 0.06% IDI 1 0.06% CMK/IspE 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 152 11 POD (70) View species results
Terpenoid pathway 134 19 BAHD (51) View species results
Alkaloid pathway 126 20 NMT (21) View species results
Rosmarinic acid pathway 65 6 C4H (40) View species results
Flavonoid pathway 64 10 UFGT (23) View species results
Steroid pathway 31 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 121 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Ppla2474950108050 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Ppla2516290180140 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Ppla2516580180420 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Ppla2528060206760 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO