PlantSME Plant secondary metabolism enzyme database

Porphyridium purpureum (porphyridium_purpureum)

Imported from atlas release summary for Porphyridium purpureum.

90
Candidate Genes
79
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 40.0% Alkaloid pathway 24.44% Steroid pathway 16.67% Phenylpropanoid pathway 8.89% Rosmarinic acid pathway 7.78% Flavonoid pathway 2.22%
Family Distribution
BAHD 8.22% 4CL 7.19% IFR 4.45% NMT 4.11% C3'H/CYP98A 3.77% TRI/TRII 3.42% CNMT 3.42% C4H 3.42%
Other Families 61.99%
More Families (71)
GS 8 2.74% STR 8 2.74% POD 8 2.74% CYP76 7 2.4% T3O 6 2.05% IFS 6 2.05% CAD 6 2.05% TAT 5 1.71% CYP71 5 1.71% PMT 4 1.37% UFGT 4 1.37% FNS 4 1.37% F3H 4 1.37% ANR 4 1.37% CPR 4 1.37% SMT1/SMT2/SMT3 4 1.37% CAS 4 1.37% FPPS 4 1.37% G8O/G8H 3 1.03% F3'H/CYP75B 3 1.03% DWF4/CYP90B1 3 1.03% DET2 3 1.03% DWF1 3 1.03% SQE 3 1.03% UGT 3 1.03% 7DLGT 2 0.68% SLS 2 0.68% H6H 2 0.68% 8HGO 2 0.68% BBE 2 0.68% TDC 2 0.68% LAMT 2 0.68% CSE 2 0.68% RAS 2 0.68% SMO1/SMO2 2 0.68% SQS/FDFT1 2 0.68% CYP90D1 2 0.68% CPD/CYP90A1 2 0.68% BR6OX2/CYP85A2 2 0.68% FK 2 0.68% DXR 2 0.68% HDR/IspH 2 0.68% GGPPS 2 0.68% AACT 2 0.68% ODC 1 0.34% CYP80F1 1 0.34% T16H 1 0.34% COR 1 0.34% MPO 1 0.34% NCS 1 0.34% SGD 1 0.34% CYP80B1 1 0.34% IO 1 0.34% PYKS 1 0.34% DFR 1 0.34% COMT 1 0.34% HCT 1 0.34% F5H/CYP84A 1 0.34% CCoAOMT 1 0.34% HPPR 1 0.34% CYP51G1 1 0.34% CPI1 1 0.34% BR6OX1/CYP85A1 1 0.34% HYD1 1 0.34% CMK/IspE 1 0.34% HMGS 1 0.34% DXS 1 0.34% MDS/IspF 1 0.34% IDI 1 0.34% MCT/IspD 1 0.34% HDS/IspG 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 36 13 BAHD (16) View species results
Alkaloid pathway 22 10 GS (5) View species results
Steroid pathway 15 9 CAS (4) View species results
Phenylpropanoid pathway 8 3 POD (5) View species results
Rosmarinic acid pathway 7 4 4CL (2) View species results
Flavonoid pathway 2 1 4CL (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 20 69 BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, SLS, T16H, T3O
BAHD/acyltransferase 3 27 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
KAA8491667.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
KAA8491841.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
KAA8492043.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
KAA8493195.1 Alkaloid NMT low borderline NMT__00049__sp_Q93YF5_SUVH1_TOBAC
KAA8493522.1 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
KAA8494835.1 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
KAA8495732.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
KAA8495860.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
KAA8497641.1 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
KAA8498254.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
KAA8498345.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
KAA8500022.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH