PlantSME Plant secondary metabolism enzyme database

Portulaca amilis (portulaca_amilis)

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Imported from atlas release summary for Portulaca amilis.

1817
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.54% Alkaloid pathway 20.69% Phenylpropanoid pathway 20.31% Flavonoid pathway 13.37% Rosmarinic acid pathway 9.58% Steroid pathway 5.5%
Family Distribution
C4H 6.98% C3'H/CYP98A 6.58% BAHD 5.31% CYP76 4.72% UGT 4.43% T3O 4.19% 7DLGT 4.08% IFS 4.08%
Other Families 59.61%
More Families (95)
UFGT 178 3.91% POD 170 3.73% 4CL 120 2.63% DWF4/CYP90B1 117 2.57% F3H 111 2.44% BR6OX2/CYP85A2 104 2.28% F3'H/CYP75B 99 2.17% NMT 91 2.0% CODM/T6ODM 69 1.51% CAD 61 1.34% COMT 59 1.29% G8O/G8H 56 1.23% SMT1/SMT2/SMT3 55 1.21% TRI/TRII 54 1.19% STR 54 1.19% CAS 53 1.16% H6H 52 1.14% BBE 51 1.12% TPS 50 1.1% CYP90D1 48 1.05% CYP71 48 1.05% PYKS 45 0.99% CSE 45 0.99% GES 44 0.97% HCT 40 0.88% LAC 40 0.88% 16OMT 38 0.83% IFR 34 0.75% RAS 34 0.75% SLS 32 0.7% PMT 31 0.68% GS 30 0.66% F3'5'H/CYP75A 27 0.59% ANR 27 0.59% SGD 24 0.53% TAT 23 0.5% IO 22 0.48% F5H/CYP84A 22 0.48% FPPS 22 0.48% 7DLH 21 0.46% FNS 21 0.46% T16H 20 0.44% CCR 19 0.42% CYP51G1 19 0.42% CHS 16 0.35% BR6OX1/CYP85A1 16 0.35% DFR 15 0.33% CPR 15 0.33% COR 14 0.31% CPD/CYP90A1 14 0.31% NCS 13 0.29% 8HGO 12 0.26% PAL 12 0.26% LAMT 11 0.24% ANS/LDOX 11 0.24% CCoAOMT 11 0.24% SQS/FDFT1 10 0.22% MPO 9 0.2% DWF7 9 0.2% CNMT 8 0.18% XMT_MXMT_DXMT 8 0.18% ROT3/CYP90C1 8 0.18% ISY 7 0.15% HPPR 7 0.15% DET2 7 0.15% AACT 7 0.15% TYDC_DDC 6 0.13% CYP80B1 6 0.13% GGPPS 6 0.13% TDC 5 0.11% FLS 5 0.11% MVK 5 0.11% HDS/IspG 5 0.11% CMK/IspE 5 0.11% 6OMT_4OMT_SOMT 4 0.09% CYP719 4 0.09% SQE 4 0.09% SMO1/SMO2 4 0.09% MVD 4 0.09% DWF1 3 0.07% HYD1 3 0.07% HDR/IspH 3 0.07% DXS 3 0.07% HMGS 3 0.07% HMGR 3 0.07% CHI 2 0.04% DWF5 2 0.04% PMK 2 0.04% DXR 2 0.04% IDI 2 0.04% ADC 1 0.02% FK 1 0.02% CPI1 1 0.02% MCT/IspD 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 555 19 UGT (187) View species results
Alkaloid pathway 376 22 7DLGT (93) View species results
Phenylpropanoid pathway 369 11 POD (161) View species results
Flavonoid pathway 243 12 UFGT (170) View species results
Rosmarinic acid pathway 174 7 C4H (96) View species results
Steroid pathway 100 12 SMT1/SMT2/SMT3 (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1893 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 316 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
portulaca_amilis_FUN_001325-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00001__sp_A0AA51Z3J4_TYDC2_LOPWI
portulaca_amilis_FUN_010389-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00001__sp_A0AA51Z3J4_TYDC2_LOPWI
portulaca_amilis_FUN_024873-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
portulaca_amilis_FUN_027302-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00001__sp_A0AA51Z3J4_TYDC2_LOPWI
portulaca_amilis_FUN_033903-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00001__sp_A0AA51Z3J4_TYDC2_LOPWI
portulaca_amilis_FUN_043317-T1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO