PlantSME Plant secondary metabolism enzyme database

Portulaca oleracea (portulaca_oleracea)

Imported from atlas release summary for Portulaca oleracea.

2676
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.52% Phenylpropanoid pathway 23.06% Alkaloid pathway 20.85% Flavonoid pathway 12.78% Rosmarinic acid pathway 8.11% Steroid pathway 5.68%
Family Distribution
C4H 6.36% BAHD 5.83% C3'H/CYP98A 5.64% POD 4.61% 4CL 4.17% CYP76 4.14% UGT 3.99% 7DLGT 3.86%
Other Families 61.39%
More Families (97)
UFGT 236 3.69% IFS 200 3.13% T3O 193 3.02% F3H 168 2.63% NMT 150 2.34% DWF4/CYP90B1 143 2.24% F3'H/CYP75B 131 2.05% BR6OX2/CYP85A2 103 1.61% STR 96 1.5% CODM/T6ODM 96 1.5% CAD 96 1.5% SMT1/SMT2/SMT3 91 1.42% H6H 85 1.33% COMT 84 1.31% TRI/TRII 74 1.16% G8O/G8H 74 1.16% PYKS 69 1.08% CYP71 69 1.08% CSE 67 1.05% HCT 66 1.03% CAS 64 1.0% BBE 61 0.95% IFR 61 0.95% T16H 60 0.94% RAS 60 0.94% LAC 59 0.92% PMT 58 0.91% CYP90D1 57 0.89% TPS 57 0.89% 16OMT 55 0.86% GES 54 0.84% F3'5'H/CYP75A 49 0.77% GS 46 0.72% SGD 45 0.7% ANR 45 0.7% FNS 42 0.66% F5H/CYP84A 42 0.66% TAT 39 0.61% 7DLH 33 0.52% SLS 32 0.5% FPPS 32 0.5% IO 29 0.45% LAMT 26 0.41% CCR 26 0.41% CHS 25 0.39% CPD/CYP90A1 25 0.39% NCS 24 0.38% CYP51G1 22 0.34% BR6OX1/CYP85A1 21 0.33% COR 20 0.31% CPR 19 0.3% 8HGO 18 0.28% DFR 18 0.28% CNMT 17 0.27% CCoAOMT 17 0.27% ROT3/CYP90C1 17 0.27% TYDC_DDC 16 0.25% MPO 15 0.23% CYP719 14 0.22% SQS/FDFT1 14 0.22% AACT 14 0.22% HPPR 13 0.2% GGPPS 13 0.2% ANS/LDOX 11 0.17% XMT_MXMT_DXMT 10 0.16% CYP80B1 9 0.14% MVD 9 0.14% HMGR 8 0.13% MVK 8 0.13% TDC 7 0.11% ISY 7 0.11% SMO1/SMO2 7 0.11% FLS 6 0.09% PAL 6 0.09% DXS 6 0.09% IDI 6 0.09% HYD1 5 0.08% DET2 5 0.08% HDR/IspH 5 0.08% CHI 4 0.06% SQE 4 0.06% DXR 4 0.06% HDS/IspG 4 0.06% CMK/IspE 4 0.06% HMGS 4 0.06% DWF1 3 0.05% CYP80F1 2 0.03% 6OMT_4OMT_SOMT 2 0.03% ADC 2 0.03% DWF5 2 0.03% DWF7 2 0.03% FK 2 0.03% GPPS 2 0.03% PMK 2 0.03% MDS/IspF 2 0.03% MCT/IspD 2 0.03% CPI1 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 790 19 BAHD (297) View species results
Phenylpropanoid pathway 617 12 POD (277) View species results
Alkaloid pathway 558 22 7DLGT (116) View species results
Flavonoid pathway 342 12 UFGT (224) View species results
Rosmarinic acid pathway 217 7 C4H (73) View species results
Steroid pathway 152 11 SMT1/SMT2/SMT3 (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 499 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: XMT_MXMT_DXMT
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Gene Pathway Family Confidence Status Best Target
portulaca_oleracea_GWHPCBIU003249 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU003254 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU011494 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU019058 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00001__sp_A0A0S2PM82_TCS3_CAMSI
portulaca_oleracea_GWHPCBIU020586 Alkaloid XMT_MXMT_DXMT low borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU020590 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU020595 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU024537 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00003__sp_A0A0S2PMA8_TCS1D_CAMTA
portulaca_oleracea_GWHPCBIU026679 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
portulaca_oleracea_GWHPCBIU039981 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA