PlantSME Plant secondary metabolism enzyme database

Prunus campanulata (prunus_campanulata)

Imported from atlas release summary for Prunus campanulata.

1789
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.84% Alkaloid pathway 23.03% Phenylpropanoid pathway 18.84% Flavonoid pathway 14.59% Rosmarinic acid pathway 9.61% Steroid pathway 5.09%
Family Distribution
C4H 6.07% C3'H/CYP98A 5.68% BAHD 5.63% UGT 5.18% 7DLGT 5.01% UFGT 4.96% IFS 3.83% CYP76 3.46%
Other Families 60.19%
More Families (95)
T3O 130 3.21% POD 130 3.21% F3H 127 3.13% 4CL 120 2.96% DWF4/CYP90B1 99 2.44% CAD 84 2.07% STR 76 1.88% CODM/T6ODM 73 1.8% F3'H/CYP75B 66 1.63% H6H 62 1.53% NMT 62 1.53% BR6OX2/CYP85A2 62 1.53% SGD 59 1.46% GS 57 1.41% TAT 56 1.38% CAS 53 1.31% HCT 47 1.16% SMT1/SMT2/SMT3 45 1.11% LAC 43 1.06% CYP71 43 1.06% TRI/TRII 42 1.04% GES 41 1.01% TPS 41 1.01% 7DLH 40 0.99% CSE 40 0.99% BBE 38 0.94% CYP90D1 38 0.94% IFR 37 0.91% COMT 35 0.86% ANR 30 0.74% PYKS 29 0.72% RAS 26 0.64% T16H 25 0.62% BR6OX1/CYP85A1 25 0.62% IO 24 0.59% 16OMT 24 0.59% PMT 23 0.57% LAMT 23 0.57% NCS 22 0.54% CCR 22 0.54% SLS 20 0.49% FNS 19 0.47% F3'5'H/CYP75A 17 0.42% G8O/G8H 15 0.37% F5H/CYP84A 15 0.37% COR 14 0.35% CYP51G1 12 0.3% CPD/CYP90A1 12 0.3% ROT3/CYP90C1 12 0.3% 8HGO 10 0.25% CHS 10 0.25% CCoAOMT 10 0.25% CNMT 9 0.22% PAL 9 0.22% FPPS 8 0.2% MPO 7 0.17% CYP719 6 0.15% ISY 6 0.15% TYDC_DDC 6 0.15% ANS/LDOX 6 0.15% DFR 6 0.15% SQS/FDFT1 6 0.15% AACT 6 0.15% CYP80B1 5 0.12% HPPR 5 0.12% SMO1/SMO2 5 0.12% GGPPS 5 0.12% CPR 4 0.1% SQE 4 0.1% MVK 4 0.1% MVD 4 0.1% TDC 3 0.07% CHI 3 0.07% DET2 3 0.07% DXS 3 0.07% HMGR 3 0.07% 6OMT_4OMT_SOMT 2 0.05% ODC 2 0.05% HYD1 2 0.05% DWF1 2 0.05% DWF5 2 0.05% MCT/IspD 2 0.05% DXR 2 0.05% PMK 2 0.05% HDS/IspG 2 0.05% XMT_MXMT_DXMT 1 0.02% ADC 1 0.02% FLS 1 0.02% DWF7 1 0.02% FK 1 0.02% CMK/IspE 1 0.02% MDS/IspF 1 0.02% HMGS 1 0.02% IDI 1 0.02% HDR/IspH 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 516 19 UGT (206) View species results
Alkaloid pathway 412 20 7DLGT (120) View species results
Phenylpropanoid pathway 337 11 POD (128) View species results
Flavonoid pathway 261 9 UFGT (192) View species results
Rosmarinic acid pathway 172 7 C4H (67) View species results
Steroid pathway 91 11 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1437 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
prunus_campanulata_evm.model.Chr01.49 Steroid ROT3/CYP90C1 low borderline
prunus_campanulata_evm.model.Chr02.2174 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr02.2175 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr02.2183 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr02.3437 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr04.1087 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr04.2261 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr05.2077 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr05.2078 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr06.374 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr07.2004 Steroid ROT3/CYP90C1 medium borderline
prunus_campanulata_evm.model.Chr07.2205 Steroid ROT3/CYP90C1 low borderline