Prunus domestica (prunus_domestica)
Imported from atlas release summary for Prunus domestica.
6649
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
6649
Candidate Genes
BAHD
6.96%
C4H
6.74%
C3'H/CYP98A
5.01%
UGT
4.92%
4CL
4.11%
7DLGT
3.89%
CYP76
3.64%
POD
3.51%
Other Families
61.22%
More Families (97)
IFS
563
3.23%
F3H
548
3.14%
T3O
390
2.24%
CAD
362
2.08%
DWF4/CYP90B1
360
2.07%
STR
339
1.94%
H6H
328
1.88%
NMT
314
1.8%
UFGT
310
1.78%
CODM/T6ODM
302
1.73%
GS
277
1.59%
F3'H/CYP75B
266
1.53%
TAT
257
1.47%
HCT
255
1.46%
G8O/G8H
249
1.43%
TRI/TRII
237
1.36%
LAC
234
1.34%
FNS
227
1.3%
T16H
214
1.23%
SMT1/SMT2/SMT3
211
1.21%
BBE
199
1.14%
RAS
185
1.06%
CAS
183
1.05%
BR6OX2/CYP85A2
167
0.96%
IFR
154
0.88%
CYP71
154
0.88%
COMT
149
0.85%
F3'5'H/CYP75A
140
0.8%
PMT
135
0.77%
BR6OX1/CYP85A1
134
0.77%
IO
133
0.76%
PYKS
133
0.76%
NCS
132
0.76%
SLS
118
0.68%
TPS
116
0.67%
ANR
112
0.64%
16OMT
109
0.63%
LAMT
107
0.61%
CYP90D1
105
0.6%
GES
98
0.56%
COR
92
0.53%
CCR
92
0.53%
F5H/CYP84A
89
0.51%
8HGO
84
0.48%
7DLH
80
0.46%
SGD
74
0.42%
CSE
74
0.42%
CPD/CYP90A1
60
0.34%
ANS/LDOX
57
0.33%
CNMT
47
0.27%
ISY
46
0.26%
CYP80B1
43
0.25%
PAL
42
0.24%
DFR
41
0.24%
ROT3/CYP90C1
40
0.23%
CCoAOMT
39
0.22%
TYDC_DDC
38
0.22%
HPPR
32
0.18%
MPO
31
0.18%
FPPS
31
0.18%
MVD
29
0.17%
SQS/FDFT1
28
0.16%
SQE
28
0.16%
AACT
28
0.16%
CHS
26
0.15%
GGPPS
24
0.14%
CHI
22
0.13%
CYP51G1
22
0.13%
MVK
22
0.13%
CYP719
21
0.12%
HMGR
21
0.12%
XMT_MXMT_DXMT
20
0.11%
SMO1/SMO2
20
0.11%
TDC
19
0.11%
CPR
19
0.11%
DET2
17
0.1%
DXS
17
0.1%
FLS
16
0.09%
HDR/IspH
13
0.07%
DXR
12
0.07%
ODC
10
0.06%
FK
9
0.05%
DWF5
8
0.05%
PMK
8
0.05%
HDS/IspG
8
0.05%
DWF7
7
0.04%
HYD1
7
0.04%
DWF1
7
0.04%
HMGS
7
0.04%
MCT/IspD
7
0.04%
CYP80F1
6
0.03%
ADC
6
0.03%
CPI1
6
0.03%
MDS/IspF
6
0.03%
CMK/IspE
3
0.02%
IDI
3
0.02%
6OMT_4OMT_SOMT
2
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 2233 | 19 | BAHD (958) | View species results |
| Phenylpropanoid pathway | 1519 | 12 | POD (547) | View species results |
| Alkaloid pathway | 1299 | 25 | TRI/TRII (168) | View species results |
| Rosmarinic acid pathway | 685 | 7 | TAT (203) | View species results |
| Flavonoid pathway | 504 | 16 | 4CL (163) | View species results |
| Steroid pathway | 409 | 14 | CAS (159) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 6037 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 1653 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_domestica_Pd.00g013920.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g013930.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g014190.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g015580.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g018790.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025290.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025480.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025490.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025700.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025710.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g025990.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g032370.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| prunus_domestica_Pd.00g035680.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| prunus_domestica_Pd.00g037980.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| prunus_domestica_Pd.00g044250.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| prunus_domestica_Pd.00g060510.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| prunus_domestica_Pd.00g079530.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g083040.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| prunus_domestica_Pd.00g083050.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| prunus_domestica_Pd.00g083060.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| prunus_domestica_Pd.00g083670.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| prunus_domestica_Pd.00g1003390.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1015770.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| prunus_domestica_Pd.00g1034570.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| prunus_domestica_Pd.00g1034590.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| prunus_domestica_Pd.00g103480.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| prunus_domestica_Pd.00g1038280.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g1040790.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| prunus_domestica_Pd.00g1050970.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g1092360.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| prunus_domestica_Pd.00g109860.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g110200.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g110210.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g110490.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1105350.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| prunus_domestica_Pd.00g112450.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g1136040.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| prunus_domestica_Pd.00g1138650.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| prunus_domestica_Pd.00g1160150.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| prunus_domestica_Pd.00g1161910.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| prunus_domestica_Pd.00g1172900.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1185570.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| prunus_domestica_Pd.00g1185880.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| prunus_domestica_Pd.00g1187620.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| prunus_domestica_Pd.00g1187950.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1187960.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1191170.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g1199960.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| prunus_domestica_Pd.00g121020.m01-v1.0 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| prunus_domestica_Pd.00g1212140.m01-v1.0 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |