Prunus humilis (prunus_humilis)
Imported from atlas release summary for Prunus humilis.
1933
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1933
Candidate Genes
C4H
6.25%
BAHD
5.91%
C3'H/CYP98A
5.78%
UGT
5.39%
UFGT
5.0%
7DLGT
4.96%
CYP76
3.78%
IFS
3.75%
Other Families
59.18%
More Families (96)
T3O
142
3.23%
4CL
141
3.21%
POD
141
3.21%
F3H
134
3.05%
DWF4/CYP90B1
89
2.02%
NMT
83
1.89%
STR
79
1.8%
CAD
78
1.77%
CODM/T6ODM
77
1.75%
BR6OX2/CYP85A2
67
1.52%
H6H
66
1.5%
F3'H/CYP75B
60
1.36%
HCT
59
1.34%
TRI/TRII
54
1.23%
TAT
54
1.23%
GS
52
1.18%
SMT1/SMT2/SMT3
52
1.18%
CAS
50
1.14%
CYP90D1
48
1.09%
LAC
46
1.05%
CSE
44
1.0%
CYP71
42
0.96%
SGD
38
0.86%
T16H
37
0.84%
RAS
37
0.84%
TPS
37
0.84%
COMT
36
0.82%
7DLH
34
0.77%
IFR
34
0.77%
GES
33
0.75%
PYKS
32
0.73%
16OMT
30
0.68%
BR6OX1/CYP85A1
30
0.68%
ANR
29
0.66%
IO
27
0.61%
PMT
27
0.61%
F3'5'H/CYP75A
26
0.59%
NCS
25
0.57%
SLS
24
0.55%
COR
22
0.5%
FNS
22
0.5%
CCR
22
0.5%
8HGO
20
0.45%
LAMT
20
0.45%
G8O/G8H
18
0.41%
BBE
17
0.39%
CPD/CYP90A1
17
0.39%
F5H/CYP84A
14
0.32%
CHS
12
0.27%
ISY
11
0.25%
CNMT
11
0.25%
ROT3/CYP90C1
11
0.25%
TYDC_DDC
10
0.23%
DFR
10
0.23%
MPO
9
0.2%
PAL
9
0.2%
CYP51G1
9
0.2%
CYP80B1
8
0.18%
ANS/LDOX
8
0.18%
CCoAOMT
8
0.18%
DXS
8
0.18%
FPPS
8
0.18%
SQE
7
0.16%
SQS/FDFT1
7
0.16%
SMO1/SMO2
7
0.16%
TDC
6
0.14%
HPPR
6
0.14%
AACT
6
0.14%
CYP719
5
0.11%
MVK
5
0.11%
MVD
5
0.11%
GGPPS
5
0.11%
CHI
4
0.09%
CPR
4
0.09%
DET2
4
0.09%
HMGR
3
0.07%
ODC
2
0.05%
6OMT_4OMT_SOMT
2
0.05%
FK
2
0.05%
DWF5
2
0.05%
MCT/IspD
2
0.05%
HDS/IspG
2
0.05%
HDR/IspH
2
0.05%
CMK/IspE
2
0.05%
PMK
2
0.05%
DXR
2
0.05%
XMT_MXMT_DXMT
1
0.02%
ADC
1
0.02%
FLS
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
HMGS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 580 | 19 | UGT (231) | View species results |
| Alkaloid pathway | 434 | 24 | 7DLGT (126) | View species results |
| Phenylpropanoid pathway | 351 | 12 | POD (135) | View species results |
| Flavonoid pathway | 274 | 11 | UFGT (206) | View species results |
| Rosmarinic acid pathway | 196 | 7 | C4H (81) | View species results |
| Steroid pathway | 98 | 11 | CAS (40) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1568 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 356 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_humilis_GWHPBCKI019570 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI019797 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI020432 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI020435 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI020583 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI020674 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021552 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021553 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021554 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021556 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021751 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021752 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI021753 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI022228 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI022231 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI023963 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI024691 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI024696 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI025056 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI025148 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI025182 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI025185 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI025186 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI026893 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI026896 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI026897 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI026898 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI027700 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| prunus_humilis_GWHPBCKI030482 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |