PlantSME Plant secondary metabolism enzyme database

Prunus persica (prunus_persica)

Imported from atlas release summary for Prunus persica.

2327
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.8% Alkaloid pathway 26.73% Phenylpropanoid pathway 19.64% Flavonoid pathway 11.95% Rosmarinic acid pathway 7.56% Steroid pathway 6.32%
Family Distribution
C3'H/CYP98A 5.5% BAHD 5.47% C4H 5.43% UGT 4.13% 7DLGT 3.84% UFGT 3.84% CYP76 3.53% 4CL 3.35%
Other Families 64.9%
More Families (96)
IFS 182 3.33% NMT 170 3.11% POD 170 3.11% T3O 168 3.07% F3H 167 3.05% CAD 137 2.51% STR 119 2.18% SGD 112 2.05% DWF4/CYP90B1 109 1.99% GS 98 1.79% CODM/T6ODM 94 1.72% F3'H/CYP75B 94 1.72% CAS 80 1.46% H6H 78 1.43% SMT1/SMT2/SMT3 77 1.41% BR6OX2/CYP85A2 76 1.39% TRI/TRII 64 1.17% TPS 64 1.17% GES 61 1.12% IFR 59 1.08% CYP71 56 1.02% CYP90D1 54 0.99% COMT 51 0.93% CSE 48 0.88% 7DLH 47 0.86% LAC 46 0.84% BBE 45 0.82% ANR 44 0.8% PMT 43 0.79% PYKS 40 0.73% HCT 40 0.73% NCS 39 0.71% IO 38 0.69% 16OMT 37 0.68% BR6OX1/CYP85A1 37 0.68% T16H 36 0.66% RAS 36 0.66% LAMT 35 0.64% FNS 35 0.64% CCoAOMT 34 0.62% TAT 31 0.57% CCR 30 0.55% 8HGO 28 0.51% SLS 28 0.51% F3'5'H/CYP75A 26 0.48% CPD/CYP90A1 23 0.42% F5H/CYP84A 22 0.4% G8O/G8H 19 0.35% COR 19 0.35% CYP51G1 17 0.31% ROT3/CYP90C1 17 0.31% FPPS 17 0.31% DFR 15 0.27% PAL 15 0.27% HPPR 14 0.26% CNMT 12 0.22% ISY 12 0.22% CHS 12 0.22% AACT 11 0.2% MPO 10 0.18% DXS 9 0.16% CPR 8 0.15% TYDC_DDC 7 0.13% SQS/FDFT1 7 0.13% CYP719 6 0.11% ANS/LDOX 6 0.11% SQE 6 0.11% DET2 6 0.11% MCT/IspD 6 0.11% GGPPS 6 0.11% CYP80B1 5 0.09% CHI 5 0.09% FK 5 0.09% MVD 5 0.09% HMGS 5 0.09% DXR 5 0.09% HDS/IspG 5 0.09% HDR/IspH 5 0.09% ODC 4 0.07% CMK/IspE 4 0.07% TDC 3 0.05% HYD1 3 0.05% SMO1/SMO2 3 0.05% DWF5 3 0.05% CPI1 3 0.05% MVK 3 0.05% IDI 3 0.05% HMGR 3 0.05% XMT_MXMT_DXMT 2 0.04% FLS 2 0.04% DWF1 2 0.04% PMK 2 0.04% ADC 1 0.02% 6OMT_4OMT_SOMT 1 0.02% DWF7 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 647 19 BAHD (242) View species results
Alkaloid pathway 622 22 7DLGT (123) View species results
Phenylpropanoid pathway 457 11 POD (168) View species results
Flavonoid pathway 278 10 UFGT (196) View species results
Rosmarinic acid pathway 176 7 C4H (70) View species results
Steroid pathway 147 12 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1851 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
Pper01G0000290.1 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pper01G0000290.2 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pper01G0000300.1 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pper02G0012260.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pper04G0025210.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pper04G0025280.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pper04G0025300.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pper04G0025310.1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Pper08G0015960.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pperscaffold_710000570.1 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pperscaffold_710000570.2 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pperscaffold_710000580.1 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID