Prunus salicina (prunus_salicina)
Imported from atlas release summary for Prunus salicina.
1434
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1434
Candidate Genes
C4H
7.96%
BAHD
7.14%
C3'H/CYP98A
4.64%
4CL
3.62%
F3H
3.6%
CYP76
3.54%
UGT
3.51%
POD
3.49%
Other Families
62.5%
More Families (96)
IFS
114
3.13%
CODM/T6ODM
79
2.17%
CAD
77
2.11%
7DLGT
75
2.06%
G8O/G8H
75
2.06%
T3O
70
1.92%
STR
68
1.87%
NMT
67
1.84%
TAT
65
1.78%
HCT
64
1.76%
CAS
64
1.76%
F3'H/CYP75B
62
1.7%
UFGT
62
1.7%
T16H
60
1.65%
DWF4/CYP90B1
58
1.59%
FNS
54
1.48%
TPS
54
1.48%
GES
52
1.43%
H6H
52
1.43%
GS
48
1.32%
LAC
47
1.29%
TRI/TRII
44
1.21%
CSE
44
1.21%
RAS
43
1.18%
IFR
39
1.07%
SLS
35
0.96%
CYP71
34
0.93%
PMT
31
0.85%
F3'5'H/CYP75A
31
0.85%
F5H/CYP84A
31
0.85%
SMT1/SMT2/SMT3
30
0.82%
PYKS
29
0.8%
BR6OX1/CYP85A1
26
0.71%
SGD
25
0.69%
BR6OX2/CYP85A2
24
0.66%
LAMT
22
0.6%
NCS
21
0.58%
ANR
21
0.58%
CCR
21
0.58%
COR
20
0.55%
IO
19
0.52%
CPD/CYP90A1
19
0.52%
COMT
17
0.47%
CYP90D1
16
0.44%
DFR
15
0.41%
MPO
14
0.38%
ROT3/CYP90C1
13
0.36%
7DLH
12
0.33%
ISY
10
0.27%
8HGO
9
0.25%
CNMT
9
0.25%
6OMT_4OMT_SOMT
9
0.25%
PAL
9
0.25%
CYP51G1
9
0.25%
TYDC_DDC
8
0.22%
CCoAOMT
8
0.22%
HPPR
8
0.22%
SQS/FDFT1
8
0.22%
AACT
8
0.22%
CYP719
7
0.19%
CHS
7
0.19%
TDC
6
0.16%
SQE
6
0.16%
MVD
6
0.16%
GGPPS
6
0.16%
FPPS
6
0.16%
CYP80B1
5
0.14%
ANS/LDOX
5
0.14%
SMO1/SMO2
5
0.14%
DXS
5
0.14%
16OMT
4
0.11%
CHI
4
0.11%
FLS
4
0.11%
CPR
4
0.11%
BBE
3
0.08%
ODC
3
0.08%
MVK
3
0.08%
HDR/IspH
3
0.08%
HMGR
3
0.08%
DWF1
2
0.05%
DET2
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
DXR
2
0.05%
HMGS
2
0.05%
MCT/IspD
2
0.05%
CYP80F1
1
0.03%
ADC
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
DWF7
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
IDI
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 444 | 18 | BAHD (202) | View species results |
| Phenylpropanoid pathway | 323 | 12 | POD (120) | View species results |
| Alkaloid pathway | 316 | 24 | GES (48) | View species results |
| Rosmarinic acid pathway | 146 | 7 | TAT (56) | View species results |
| Flavonoid pathway | 118 | 12 | UFGT (48) | View species results |
| Steroid pathway | 87 | 11 | CAS (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1309 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 367 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| prunus_salicina_evm.model.LG06.2360 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| prunus_salicina_evm.model.LG06.3038 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| prunus_salicina_evm.model.LG06.3085 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| prunus_salicina_evm.model.LG07.1009 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| prunus_salicina_evm.model.LG07.1222 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| prunus_salicina_evm.model.LG07.1366 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| prunus_salicina_evm.model.LG07.1434 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| prunus_salicina_evm.model.LG07.1436 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| prunus_salicina_evm.model.LG07.1487 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| prunus_salicina_evm.model.LG07.2667 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| prunus_salicina_evm.model.LG07.2758 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| prunus_salicina_evm.model.LG07.333 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| prunus_salicina_evm.model.LG07.4 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| prunus_salicina_evm.model.LG07.571 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| prunus_salicina_evm.model.LG07.854 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| prunus_salicina_evm.model.LG08.1105 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| prunus_salicina_evm.model.LG08.621 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |