PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

917
Candidate Protein Records
658
Pathway-Level Records
1753
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pcin1832120082410 Flavonoid C4H medium pass
Pcin1882150108260 Flavonoid C4H medium borderline
Pcin1900620122400 Flavonoid C4H medium borderline
Pcin1941350157100 Flavonoid C4H medium pass
Pcin1976250199110 Flavonoid C4H medium pass
Pcin2012880260560 Flavonoid C4H medium borderline
Pcin2023570281370 Flavonoid C4H low borderline
Pcin1060250000510 Rosmarinic Acid C4H low borderline
Pcin1064120000840 Rosmarinic Acid C4H low borderline
Pcin1069760001570 Rosmarinic Acid C4H low borderline
Pcin1069990001590 Rosmarinic Acid C4H low borderline
Pcin1155460004650 Rosmarinic Acid C4H low borderline
Pcin1254070013170 Rosmarinic Acid C4H low borderline
Pcin1274900014090 Rosmarinic Acid C4H low borderline
Pcin1322080016370 Rosmarinic Acid C4H medium pass
Pcin1422580017350 Rosmarinic Acid C4H medium pass
Pcin1422580017370 Rosmarinic Acid C4H low borderline
Pcin1504160019860 Rosmarinic Acid C4H low borderline
Pcin1516040023660 Rosmarinic Acid C4H medium pass
Pcin1523850027280 Rosmarinic Acid C4H low borderline
Pcin1548670029790 Rosmarinic Acid C4H low borderline
Pcin1551580030590 Rosmarinic Acid C4H low borderline
Pcin1606010036650 Rosmarinic Acid C4H medium pass
Pcin1627690037520 Rosmarinic Acid C4H low borderline
Pcin1648800040740 Rosmarinic Acid C4H low borderline
Pcin1732220053770 Rosmarinic Acid C4H medium pass
Pcin1737380055450 Rosmarinic Acid C4H medium pass
Pcin1764440061950 Rosmarinic Acid C4H low borderline
Pcin1771280066410 Rosmarinic Acid C4H low borderline
Pcin1772040066890 Rosmarinic Acid C4H low borderline
Pcin1774160067890 Rosmarinic Acid C4H low borderline
Pcin1794700072200 Rosmarinic Acid C4H low borderline
Pcin1797350072900 Rosmarinic Acid C4H low borderline
Pcin1832120082410 Rosmarinic Acid C4H medium pass
Pcin1834170083340 Rosmarinic Acid C4H low borderline
Pcin1837690086370 Rosmarinic Acid C4H low borderline
Pcin1840270086870 Rosmarinic Acid C4H low borderline
Pcin1843110087950 Rosmarinic Acid C4H low borderline
Pcin1848770091410 Rosmarinic Acid C4H low borderline
Pcin1868600099770 Rosmarinic Acid C4H low borderline
Pcin1869180100070 Rosmarinic Acid C4H low borderline
Pcin1874930104130 Rosmarinic Acid C4H low borderline
Pcin1878280106180 Rosmarinic Acid C4H medium pass
Pcin1879520107120 Rosmarinic Acid C4H low borderline
Pcin1882150108260 Rosmarinic Acid C4H medium pass
Pcin1885070110610 Rosmarinic Acid C4H low borderline
Pcin1886550111990 Rosmarinic Acid C4H low borderline
Pcin1896680119550 Rosmarinic Acid C4H medium pass
Pcin1897470120430 Rosmarinic Acid C4H low borderline
Pcin1897650120500 Rosmarinic Acid C4H low borderline