PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pcin1346100016710 Flavonoid 4CL medium pass
Pcin1744590057650 Flavonoid 4CL low borderline
Pcin1769280065150 Flavonoid 4CL medium pass
Pcin1863840097420 Flavonoid 4CL medium pass
Pcin1886650112070 Flavonoid 4CL medium pass
Pcin1886870112320 Flavonoid 4CL low borderline
Pcin1888190113970 Flavonoid 4CL medium pass
Pcin1898700121090 Flavonoid 4CL low borderline
Pcin1898760121140 Flavonoid 4CL medium pass
Pcin1899500121600 Flavonoid 4CL medium pass
Pcin1905430124360 Flavonoid 4CL medium pass
Pcin1915170133300 Flavonoid 4CL medium pass
Pcin1950590167140 Flavonoid 4CL low borderline
Pcin1980540204750 Flavonoid 4CL low borderline
Pcin1985790213110 Flavonoid 4CL low borderline
Pcin1985790213120 Flavonoid 4CL medium pass
Pcin1999280235280 Flavonoid 4CL low borderline
Pcin2002270240910 Flavonoid 4CL low borderline
Pcin2011840258440 Flavonoid 4CL medium pass
Pcin2012120259050 Flavonoid 4CL low borderline
Pcin2012970260630 Flavonoid 4CL low borderline
Pcin2013530261910 Flavonoid 4CL low borderline
Pcin2014560263950 Flavonoid 4CL low borderline
Pcin2033620301010 Flavonoid 4CL medium pass
Pcin2038980303940 Flavonoid 4CL low borderline
Pcin1071210001670 Flavonoid ANR medium borderline
Pcin1238360010950 Flavonoid ANR low borderline
Pcin1531160028160 Flavonoid ANR medium borderline
Pcin1701670045710 Flavonoid ANR medium borderline
Pcin1724450050290 Flavonoid ANR medium borderline
Pcin1914190132320 Flavonoid ANR medium borderline
Pcin1943520159720 Flavonoid ANR medium borderline
Pcin1519600026280 Flavonoid ANS/LDOX low borderline
Pcin1705100046490 Flavonoid ANS/LDOX low borderline
Pcin1889260114820 Flavonoid ANS/LDOX low borderline
Pcin2011310257420 Flavonoid ANS/LDOX medium borderline
Pcin1832120082410 Flavonoid C4H medium pass
Pcin1882150108260 Flavonoid C4H medium borderline
Pcin1900620122400 Flavonoid C4H medium borderline
Pcin1941350157100 Flavonoid C4H medium pass
Pcin1976250199110 Flavonoid C4H medium pass
Pcin2012880260560 Flavonoid C4H medium borderline
Pcin2023570281370 Flavonoid C4H low borderline
Pcin1983310209150 Flavonoid CHI medium pass
Pcin1988630218260 Flavonoid CHI low borderline
Pcin1290590015690 Flavonoid CHS medium pass
Pcin1521060026810 Flavonoid CHS medium pass
Pcin1597180033910 Flavonoid CHS medium pass
Pcin1629750038100 Flavonoid CHS medium pass
Pcin1707500046990 Flavonoid CHS medium pass