PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Pcin1898420120740 Rosmarinic Acid C4H medium pass
Pcin1900620122400 Rosmarinic Acid C4H medium pass
Pcin1909200127170 Rosmarinic Acid C4H low borderline
Pcin1917720135190 Rosmarinic Acid C4H low borderline
Pcin1926960144370 Rosmarinic Acid C4H low borderline
Pcin1932160147890 Rosmarinic Acid C4H medium pass
Pcin1941350157080 Rosmarinic Acid C4H medium pass
Pcin1941350157100 Rosmarinic Acid C4H medium pass
Pcin1941350157110 Rosmarinic Acid C4H low borderline
Pcin1941350157120 Rosmarinic Acid C4H medium pass
Pcin1941910157860 Rosmarinic Acid C4H low borderline
Pcin1944660160650 Rosmarinic Acid C4H low borderline
Pcin1944940160760 Rosmarinic Acid C4H low borderline
Pcin1945610161380 Rosmarinic Acid C4H low borderline
Pcin1947810164060 Rosmarinic Acid C4H low borderline
Pcin1952360168920 Rosmarinic Acid C4H medium pass
Pcin1953140169830 Rosmarinic Acid C4H low borderline
Pcin1955740172400 Rosmarinic Acid C4H low borderline
Pcin1956690173740 Rosmarinic Acid C4H medium pass
Pcin1958010175920 Rosmarinic Acid C4H low borderline
Pcin1962430181290 Rosmarinic Acid C4H low borderline
Pcin1962990182310 Rosmarinic Acid C4H medium pass
Pcin1964080183860 Rosmarinic Acid C4H medium pass
Pcin1964170184010 Rosmarinic Acid C4H low borderline
Pcin1965460185550 Rosmarinic Acid C4H low borderline
Pcin1971240192890 Rosmarinic Acid C4H low borderline
Pcin1976250199110 Rosmarinic Acid C4H medium pass
Pcin1978220201600 Rosmarinic Acid C4H low borderline
Pcin1978640201900 Rosmarinic Acid C4H low borderline
Pcin1981610206340 Rosmarinic Acid C4H low borderline
Pcin1982290207030 Rosmarinic Acid C4H low borderline
Pcin1982970208410 Rosmarinic Acid C4H low borderline
Pcin1983250209000 Rosmarinic Acid C4H low borderline
Pcin1985180212320 Rosmarinic Acid C4H low borderline
Pcin1986810214690 Rosmarinic Acid C4H low borderline
Pcin1988300217790 Rosmarinic Acid C4H low borderline
Pcin1991480222170 Rosmarinic Acid C4H low borderline
Pcin1999310235310 Rosmarinic Acid C4H low borderline
Pcin2000100236650 Rosmarinic Acid C4H medium pass
Pcin2000100236660 Rosmarinic Acid C4H low borderline
Pcin2000340237330 Rosmarinic Acid C4H low borderline
Pcin2003730243490 Rosmarinic Acid C4H low borderline
Pcin2005350246010 Rosmarinic Acid C4H medium pass
Pcin2005950246870 Rosmarinic Acid C4H low borderline
Pcin2009990254600 Rosmarinic Acid C4H medium pass
Pcin2010080254710 Rosmarinic Acid C4H low borderline
Pcin2010820256340 Rosmarinic Acid C4H low borderline
Pcin2012830260510 Rosmarinic Acid C4H low borderline
Pcin2012880260560 Rosmarinic Acid C4H medium pass
Pcin2013780262440 Rosmarinic Acid C4H low borderline