PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

917
Candidate Protein Records
658
Pathway-Level Records
1753
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcin1951090167620 Alkaloid T3O low borderline
Pcin1952360168920 Alkaloid T3O medium borderline
Pcin1955740172400 Alkaloid T3O medium pass
Pcin1962990182310 Alkaloid T3O medium borderline
Pcin1964080183860 Alkaloid T3O medium borderline
Pcin1964850184800 Alkaloid T3O low borderline
Pcin1965460185550 Alkaloid T3O medium borderline
Pcin1981610206340 Alkaloid T3O medium borderline
Pcin2000340237330 Alkaloid T3O medium borderline
Pcin2002030240410 Alkaloid T3O medium pass
Pcin2010080254710 Alkaloid T3O medium pass
Pcin2011060256710 Alkaloid T3O medium pass
Pcin2013780262440 Alkaloid T3O medium borderline
Pcin2021370276710 Alkaloid T3O medium borderline
Pcin2022090278060 Alkaloid T3O medium borderline
Pcin2025230285270 Alkaloid T3O medium pass
Pcin1801710075520 Alkaloid TDC low borderline
Pcin1889270114850 Alkaloid TDC low borderline
Pcin1921360138410 Alkaloid TDC low borderline
Pcin1941880157790 Alkaloid TDC low borderline
Pcin2025950286260 Alkaloid TDC low borderline
Pcin2033620301020 Alkaloid TDC medium borderline
Pcin1550500030320 Alkaloid TRI/TRII medium pass
Pcin1559710032030 Alkaloid TRI/TRII medium pass
Pcin1660550042980 Alkaloid TRI/TRII medium pass
Pcin1711830047810 Alkaloid TRI/TRII low borderline
Pcin1765260062620 Alkaloid TRI/TRII medium pass
Pcin1765260062630 Alkaloid TRI/TRII medium pass
Pcin1818700077880 Alkaloid TRI/TRII low borderline
Pcin1832200082440 Alkaloid TRI/TRII medium pass
Pcin1836820085580 Alkaloid TRI/TRII low borderline
Pcin1899040121320 Alkaloid TRI/TRII low borderline
Pcin1911000128510 Alkaloid TRI/TRII medium pass
Pcin1914840132960 Alkaloid TRI/TRII low borderline
Pcin1959920178240 Alkaloid TRI/TRII medium pass
Pcin1965720186030 Alkaloid TRI/TRII low borderline
Pcin2004120244040 Alkaloid TRI/TRII low borderline
Pcin2011130256930 Alkaloid TRI/TRII medium pass
Pcin1996740230720 Alkaloid TYDC_DDC medium borderline