PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

917
Candidate Protein Records
658
Pathway-Level Records
1753
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pcin1998240233100 Flavonoid UFGT medium pass
Pcin1999970236330 Flavonoid UFGT medium pass
Pcin2001030238710 Flavonoid UFGT medium pass
Pcin2010420255460 Flavonoid UFGT medium pass
Pcin2019180272360 Flavonoid UFGT medium pass
Pcin2019560273050 Flavonoid UFGT medium pass
Pcin2021820277390 Flavonoid UFGT high pass
Pcin2026730287650 Flavonoid UFGT high pass
Pcin2028940292150 Flavonoid UFGT medium pass
Pcin2030140294980 Flavonoid UFGT medium pass
Pcin2034290301660 Flavonoid UFGT medium pass
Pcin1346100016710 Phenylpropanoid 4CL medium pass
Pcin1744590057650 Phenylpropanoid 4CL low borderline
Pcin1769280065150 Phenylpropanoid 4CL medium pass
Pcin1863840097420 Phenylpropanoid 4CL medium pass
Pcin1886650112070 Phenylpropanoid 4CL medium pass
Pcin1886870112320 Phenylpropanoid 4CL low borderline
Pcin1888190113970 Phenylpropanoid 4CL medium pass
Pcin1898700121090 Phenylpropanoid 4CL low borderline
Pcin1898760121140 Phenylpropanoid 4CL medium pass
Pcin1899500121600 Phenylpropanoid 4CL medium pass
Pcin1905430124360 Phenylpropanoid 4CL medium pass
Pcin1915170133300 Phenylpropanoid 4CL medium pass
Pcin1950590167140 Phenylpropanoid 4CL low borderline
Pcin1980540204750 Phenylpropanoid 4CL low borderline
Pcin1985790213110 Phenylpropanoid 4CL low borderline
Pcin1985790213120 Phenylpropanoid 4CL medium pass
Pcin1999280235280 Phenylpropanoid 4CL low borderline
Pcin2002270240910 Phenylpropanoid 4CL low borderline
Pcin2011840258440 Phenylpropanoid 4CL medium pass
Pcin2012120259050 Phenylpropanoid 4CL low borderline
Pcin2012970260630 Phenylpropanoid 4CL low borderline
Pcin2013530261910 Phenylpropanoid 4CL low borderline
Pcin2014560263950 Phenylpropanoid 4CL low borderline
Pcin2033620301010 Phenylpropanoid 4CL medium pass
Pcin2038980303940 Phenylpropanoid 4CL low borderline
Pcin1060250000510 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1064120000840 Phenylpropanoid C3'H/CYP98A medium pass
Pcin1069990001590 Phenylpropanoid C3'H/CYP98A high pass
Pcin1155460004650 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1177840005170 Phenylpropanoid C3'H/CYP98A low borderline
Pcin1254070013170 Phenylpropanoid C3'H/CYP98A low borderline
Pcin1274900014090 Phenylpropanoid C3'H/CYP98A low borderline
Pcin1282350014600 Phenylpropanoid C3'H/CYP98A low borderline
Pcin1288740015470 Phenylpropanoid C3'H/CYP98A low borderline
Pcin1322080016370 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1422580017350 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1516040023660 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1523850027280 Phenylpropanoid C3'H/CYP98A medium borderline
Pcin1548670029790 Phenylpropanoid C3'H/CYP98A medium borderline