PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pcin2034290301660 Alkaloid 7DLGT low borderline
Pcin1288740015470 Alkaloid 7DLH medium borderline
Pcin1897650120500 Alkaloid 7DLH medium borderline
Pcin1917720135190 Alkaloid 7DLH medium borderline
Pcin1945610161380 Alkaloid 7DLH medium borderline
Pcin1953140169830 Alkaloid 7DLH medium borderline
Pcin1958010175920 Alkaloid 7DLH medium borderline
Pcin1978220201600 Alkaloid 7DLH medium borderline
Pcin1988300217790 Alkaloid 7DLH medium borderline
Pcin2003730243490 Alkaloid 7DLH medium borderline
Pcin2008710252190 Alkaloid 7DLH medium borderline
Pcin2029410293250 Alkaloid 7DLH medium borderline
Pcin2029410293260 Alkaloid 7DLH medium borderline
Pcin1669030044660 Alkaloid 8HGO medium borderline
Pcin1954260170900 Alkaloid 8HGO medium borderline
Pcin1993910226240 Alkaloid 8HGO medium borderline
Pcin2004470244850 Alkaloid 8HGO medium borderline
Pcin2018100270220 Alkaloid 8HGO medium borderline
Pcin257770305680 Alkaloid 8HGO low borderline
Pcin1017330000070 Alkaloid ADC medium pass
Pcin1977620201000 Alkaloid ADC medium pass
Pcin2010240255100 Alkaloid ADC medium pass
Pcin1629630037880 Alkaloid BBE low borderline
Pcin1968020188140 Alkaloid BBE low borderline
Pcin1992470223890 Alkaloid BBE low borderline
Pcin2014140263290 Alkaloid BBE low borderline
Pcin2024650284010 Alkaloid BBE low borderline
Pcin1553580030970 Alkaloid CNMT low borderline
Pcin1798260074050 Alkaloid CNMT low borderline
Pcin1931660147500 Alkaloid CNMT low borderline
Pcin1951340167840 Alkaloid CNMT low borderline
Pcin1989190219300 Alkaloid CNMT low borderline
Pcin2004210244260 Alkaloid CNMT low borderline
Pcin2018110270230 Alkaloid CNMT low borderline
Pcin2036540302880 Alkaloid CNMT medium borderline
Pcin1246370012250 Alkaloid CODM/T6ODM medium borderline
Pcin1288490015430 Alkaloid CODM/T6ODM medium borderline
Pcin1484920019350 Alkaloid CODM/T6ODM medium borderline
Pcin1519600026270 Alkaloid CODM/T6ODM medium borderline
Pcin1702150045850 Alkaloid CODM/T6ODM medium borderline
Pcin1705100046490 Alkaloid CODM/T6ODM medium borderline
Pcin1726570051150 Alkaloid CODM/T6ODM medium borderline
Pcin1756220060390 Alkaloid CODM/T6ODM medium borderline
Pcin1841660087280 Alkaloid CODM/T6ODM medium borderline
Pcin1846640089940 Alkaloid CODM/T6ODM medium borderline
Pcin1847650090660 Alkaloid CODM/T6ODM medium borderline
Pcin1889260114820 Alkaloid CODM/T6ODM medium borderline
Pcin1910380128210 Alkaloid CODM/T6ODM medium borderline
Pcin1922160139490 Alkaloid CODM/T6ODM medium borderline
Pcin1926120143350 Alkaloid CODM/T6ODM medium borderline