PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

917
Candidate Protein Records
658
Pathway-Level Records
1753
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pcin2021370276710 Rosmarinic Acid C4H medium pass
Pcin2021370276720 Rosmarinic Acid C4H low borderline
Pcin2022090278060 Rosmarinic Acid C4H medium pass
Pcin2023570281370 Rosmarinic Acid C4H low borderline
Pcin2024630283950 Rosmarinic Acid C4H medium pass
Pcin2025230285270 Rosmarinic Acid C4H low borderline
Pcin2027760289950 Rosmarinic Acid C4H medium pass
Pcin2029410293260 Rosmarinic Acid C4H low borderline
Pcin1659940042830 Rosmarinic Acid CPR low borderline
Pcin1797280072840 Rosmarinic Acid CPR medium pass
Pcin1933170148760 Rosmarinic Acid CPR medium pass
Pcin1949030165570 Rosmarinic Acid CPR medium pass
Pcin1956860174010 Rosmarinic Acid CPR medium pass
Pcin1999650235800 Rosmarinic Acid CPR low borderline
Pcin1605210036040 Rosmarinic Acid HPPR medium pass
Pcin1709120047180 Rosmarinic Acid PAL high pass
Pcin1799870075090 Rosmarinic Acid PAL high pass
Pcin1909500127360 Rosmarinic Acid PAL high pass
Pcin1964520184420 Rosmarinic Acid PAL high pass
Pcin2022360278560 Rosmarinic Acid PAL high pass
Pcin2041290304730 Rosmarinic Acid PAL high pass
Pcin1250020012660 Rosmarinic Acid RAS low borderline
Pcin1894210118270 Rosmarinic Acid RAS medium pass
Pcin1914260132470 Rosmarinic Acid RAS medium pass
Pcin1943590159860 Rosmarinic Acid RAS low borderline
Pcin1944290160440 Rosmarinic Acid RAS medium pass
Pcin1945720161590 Rosmarinic Acid RAS low borderline
Pcin1957300174710 Rosmarinic Acid RAS low borderline
Pcin1988830218630 Rosmarinic Acid RAS low borderline
Pcin1995870229350 Rosmarinic Acid RAS medium pass
Pcin2009880254330 Rosmarinic Acid RAS medium pass
Pcin2009880254340 Rosmarinic Acid RAS medium pass
Pcin2010270255220 Rosmarinic Acid RAS low borderline
Pcin2018010270040 Rosmarinic Acid RAS low borderline
Pcin1886800112260 Rosmarinic Acid TAT low borderline
Pcin1988990218750 Rosmarinic Acid TAT low borderline
Pcin2000460237530 Rosmarinic Acid TAT medium pass
Pcin2000950238540 Rosmarinic Acid TAT medium pass
Pcin2022970280100 Rosmarinic Acid TAT medium pass
Pcin1771280066410 Steroid BR6OX1/CYP85A1 low borderline
Pcin1774160067890 Steroid BR6OX1/CYP85A1 medium borderline
Pcin1840270086870 Steroid BR6OX1/CYP85A1 medium borderline
Pcin1869180100070 Steroid BR6OX1/CYP85A1 medium borderline
Pcin1878280106180 Steroid BR6OX1/CYP85A1 medium borderline
Pcin1941350157120 Steroid BR6OX1/CYP85A1 medium borderline
Pcin2014160263400 Steroid BR6OX1/CYP85A1 medium borderline
Pcin1060250000510 Steroid BR6OX2/CYP85A2 low borderline
Pcin1155460004650 Steroid BR6OX2/CYP85A2 low borderline
Pcin1254070013170 Steroid BR6OX2/CYP85A2 low borderline
Pcin1523850027280 Steroid BR6OX2/CYP85A2 low borderline