PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcin1937340153160 Alkaloid CODM/T6ODM medium borderline
Pcin1952410168990 Alkaloid CODM/T6ODM medium borderline
Pcin1968760189090 Alkaloid CODM/T6ODM medium borderline
Pcin1974510197060 Alkaloid CODM/T6ODM medium borderline
Pcin1983940210230 Alkaloid CODM/T6ODM medium borderline
Pcin1984750211590 Alkaloid CODM/T6ODM medium borderline
Pcin1991090221580 Alkaloid CODM/T6ODM medium borderline
Pcin1995190228250 Alkaloid CODM/T6ODM medium borderline
Pcin2004430244770 Alkaloid CODM/T6ODM medium borderline
Pcin2011310257420 Alkaloid CODM/T6ODM medium borderline
Pcin2031600297560 Alkaloid CODM/T6ODM medium borderline
Pcin2034380301710 Alkaloid CODM/T6ODM medium borderline
Pcin1877440105620 Alkaloid COR low borderline
Pcin1888770114510 Alkaloid COR medium pass
Pcin1946380162440 Alkaloid COR medium pass
Pcin1961470180080 Alkaloid COR medium pass
Pcin1990460220700 Alkaloid COR medium pass
Pcin1993620225670 Alkaloid COR medium pass
Pcin1504160019860 Alkaloid CYP719 medium borderline
Pcin1797350072900 Alkaloid CYP719 medium borderline
Pcin1964170184010 Alkaloid CYP719 medium borderline
Pcin2023370280930 Alkaloid CYP719 low borderline
Pcin1771280066410 Alkaloid CYP80B1 medium borderline
Pcin1773620067740 Alkaloid CYP80B1 low borderline
Pcin2000100236660 Alkaloid CYP80B1 medium borderline
Pcin2031410297280 Alkaloid CYP80B1 medium borderline
Pcin1219270006970 Alkaloid CYP80F1 medium borderline
Pcin1983050208590 Alkaloid CYP80F1 low borderline
Pcin1985180212320 Alkaloid CYP80F1 medium borderline
Pcin2014550263930 Alkaloid CYP80F1 medium borderline
Pcin1069990001590 Alkaloid G8O/G8H medium borderline
Pcin1212140006060 Alkaloid G8O/G8H medium borderline
Pcin1232080009860 Alkaloid G8O/G8H medium borderline
Pcin1551580030590 Alkaloid G8O/G8H medium borderline
Pcin1837690086370 Alkaloid G8O/G8H medium borderline
Pcin1848770091410 Alkaloid G8O/G8H medium borderline
Pcin1868420099600 Alkaloid G8O/G8H low borderline
Pcin1923900141170 Alkaloid G8O/G8H medium pass
Pcin1926960144370 Alkaloid G8O/G8H medium borderline
Pcin1941350157100 Alkaloid G8O/G8H low borderline
Pcin1962430181290 Alkaloid G8O/G8H medium borderline
Pcin1999310235310 Alkaloid G8O/G8H medium borderline
Pcin2000100236650 Alkaloid G8O/G8H medium borderline
Pcin2016570267150 Alkaloid G8O/G8H low borderline
Pcin2021370276720 Alkaloid G8O/G8H medium pass
Pcin1548860029820 Alkaloid GES low borderline
Pcin1630700038630 Alkaloid GES low borderline
Pcin1853690094420 Alkaloid GES low borderline
Pcin1930220146150 Alkaloid GES low borderline
Pcin1531330028190 Alkaloid GS low borderline