PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pcin1982970208410 Rosmarinic Acid C4H low borderline
Pcin1983250209000 Rosmarinic Acid C4H low borderline
Pcin1985180212320 Rosmarinic Acid C4H low borderline
Pcin1986810214690 Rosmarinic Acid C4H low borderline
Pcin1988300217790 Rosmarinic Acid C4H low borderline
Pcin1991480222170 Rosmarinic Acid C4H low borderline
Pcin1999310235310 Rosmarinic Acid C4H low borderline
Pcin2000100236650 Rosmarinic Acid C4H medium pass
Pcin2000100236660 Rosmarinic Acid C4H low borderline
Pcin2000340237330 Rosmarinic Acid C4H low borderline
Pcin2003730243490 Rosmarinic Acid C4H low borderline
Pcin2005350246010 Rosmarinic Acid C4H medium pass
Pcin2005950246870 Rosmarinic Acid C4H low borderline
Pcin2009990254600 Rosmarinic Acid C4H medium pass
Pcin2010080254710 Rosmarinic Acid C4H low borderline
Pcin2010820256340 Rosmarinic Acid C4H low borderline
Pcin2012830260510 Rosmarinic Acid C4H low borderline
Pcin2012880260560 Rosmarinic Acid C4H medium pass
Pcin2013780262440 Rosmarinic Acid C4H low borderline
Pcin2014160263400 Rosmarinic Acid C4H low borderline
Pcin2014310263650 Rosmarinic Acid C4H medium pass
Pcin2018860271710 Rosmarinic Acid C4H low borderline
Pcin2021370276710 Rosmarinic Acid C4H medium pass
Pcin2021370276720 Rosmarinic Acid C4H low borderline
Pcin2022090278060 Rosmarinic Acid C4H medium pass
Pcin2023570281370 Rosmarinic Acid C4H low borderline
Pcin2024630283950 Rosmarinic Acid C4H medium pass
Pcin2025230285270 Rosmarinic Acid C4H low borderline
Pcin2027760289950 Rosmarinic Acid C4H medium pass
Pcin2029410293260 Rosmarinic Acid C4H low borderline
Pcin1659940042830 Rosmarinic Acid CPR low borderline
Pcin1797280072840 Rosmarinic Acid CPR medium pass
Pcin1933170148760 Rosmarinic Acid CPR medium pass
Pcin1949030165570 Rosmarinic Acid CPR medium pass
Pcin1956860174010 Rosmarinic Acid CPR medium pass
Pcin1999650235800 Rosmarinic Acid CPR low borderline
Pcin1605210036040 Rosmarinic Acid HPPR medium pass
Pcin1709120047180 Rosmarinic Acid PAL high pass
Pcin1799870075090 Rosmarinic Acid PAL high pass
Pcin1909500127360 Rosmarinic Acid PAL high pass
Pcin1964520184420 Rosmarinic Acid PAL high pass
Pcin2022360278560 Rosmarinic Acid PAL high pass
Pcin2041290304730 Rosmarinic Acid PAL high pass
Pcin1250020012660 Rosmarinic Acid RAS low borderline
Pcin1894210118270 Rosmarinic Acid RAS medium pass
Pcin1914260132470 Rosmarinic Acid RAS medium pass
Pcin1943590159860 Rosmarinic Acid RAS low borderline
Pcin1944290160440 Rosmarinic Acid RAS medium pass
Pcin1945720161590 Rosmarinic Acid RAS low borderline
Pcin1957300174710 Rosmarinic Acid RAS low borderline